Salvia splendens (scarlet sage): 121752438
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Entry
121752438 CDS
T07627
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121752438
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121752438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
WASH_WAHD
CTK3
Motif
Other DBs
NCBI-GeneID:
121752438
NCBI-ProteinID:
XP_042003446
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Position
10:10882665..10888934
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AA seq
528 aa
AA seq
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MGDENFNETNLTEKLSKLNSSQQSIESLSRWCISHRKKAKQVVETWEKLFKAAPNEQRVS
FLYLSNDILQNSRRKGSEFVNEFWKVLPTALKIVYESTNENCRKVAFRLVDIWEERKVFG
SRGQNLKYELQGKNPSPVKNEKIVVPNPIKVVKRDATSIRIKIAVGGLPEKILTALQLVH
DEAAKEEAALGKFQKAISSVQEIEKDILYASSQGNLNGSDAVDNLERQENVVKQCVDELE
KSEAVRADLISQLREALQDQETKLEQVRSEISVARSQIEQTANIRLQLASTSPLPPPGNQ
VVIEPSFSTAISAANVTVPPTNPLTSFVNPTAEESKKAAAAAVAAKLAASTSSAQMLTSI
LSSLVAEEAASMSSGLKRPKLEPPMSFSDGKNPEGANSTYFPTSQQAMTSMAPVQSSIAQ
SGSQVNQLQVPFLPPPPPPPPLAPPGNSPSNQMGQSNMMGLPYGYGANNLLPPPLSNAPT
GFARPNPPQQTQQQLQQQQPASGGYYRPPGIGFYGQSHQPPTPPIHRQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaaaattttaatgagactaacctgactgagaaactgtctaaactcaacagt
tctcagcaaagcattgagtctttgtcccggtggtgcatttctcatcgtaaaaaggctaag
caagttgttgaaacatgggagaagttatttaaggcagcgccaaatgaacagcgtgtttcc
tttttatacttgtccaatgacatcctgcaaaatagcaggcgcaagggcagtgaatttgtc
aatgagttctggaaggttcttccaacagctcttaagattgtttatgaaagtaccaatgaa
aattgcaggaaagttgccttcagactggttgacatctgggaagaaagaaaggtttttgga
tctaggggacaaaatttgaaatatgaattgcaggggaagaatccttctcctgtcaagaat
gagaagattgtagttcctaatcctattaaggtggtgaagagagatgcaacatctatcaga
attaaaatagctgtgggtggtttgccagaaaaaattttaaccgcgttgcagttagtacat
gatgaagctgccaaagaagaagcagcgttaggcaaatttcaaaaagcgatttcttctgta
caagaaattgagaaagatattctatatgcttcttctcaaggaaacctcaatggttctgat
gctgttgataatttagagagacaggagaatgttgttaaacaatgcgttgatgaacttgaa
aagtctgaagcagttagagctgaccttatttctcagcttagagaagcacttcaggatcaa
gaaacaaagctggagcaggttcgaagtgagatatctgttgctcgcagccagattgagcaa
acagctaatatcagactccagctagcatcaacctcccccttgccacctccaggaaaccaa
gtggtgatcgaaccctctttttctactgcaatttcagcagccaacgttactgtgcctcct
acaaatccgttgacttcatttgtgaaccccaccgcggaggagagcaagaaggctgcagct
gcagcagttgctgctaaactagctgcctcaacatcttctgcccagatgctcacatctatt
ctttcatctcttgtagcagaagaggctgcatcaatgagcagtggcttgaaacggccgaag
ctggagccaccaatgtcattttctgatgggaagaatcctgaaggagcgaattcaacctat
tttccgacctcacagcaggcaatgaccagtatggcacccgttcagtccagcattgcacag
agtggttctcaggtgaaccaactgcaggttccgtttcttccacctcctccgcctccgcca
ccacttgcacctccgggtaattccccttcaaatcaaatgggacagtctaatatgatgggg
ctgccctacggttacggtgcaaacaacctactccctccaccgctctcaaatgcaccaacg
gggtttgctaggccgaaccctcctcagcaaacacagcagcagctgcagcagcagcagcca
gcaagtggtggatactacaggccccctggtatcggattctatgggcaaagccaccagccg
ccgacgcctccaatacatcgacaatga
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