Salvia splendens (scarlet sage): 121752487
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Entry
121752487 CDS
T07627
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121752487
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121752487
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121752487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_30
AAA_19
Pyr_redox
DUF6385
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
121752487
NCBI-ProteinID:
XP_042003520
LinkDB
All DBs
Position
10:complement(7972634..7994846)
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AA seq
2085 aa
AA seq
DB search
MLMELPRLTNSLRSPFDADQAYLNRKSFLQNLNRTSSTAASGESELARKIIYRWDEASFE
VRQLYKQFVVAVVELMGGEVVSEEFQEVAIKAYRLFSGTSESEEDERDRIILSKKLELQK
LVGHTVLDANILKVASLVESLSSLQNKEHGFDYLPELTSEGSEDVEFGADLAFQPPARFL
VDISIENGEDFLEETGASSSNHDGWSNNLGPASSHTAVGAGNYDLEWLRDACDRIVSAST
SQLPRDELAMTICRILDSEKPGDEIAGDLLDFVGDSSFEIVQDLIMHRKDLVESIHHGLL
VLKSDRSTSNTQIKYPSYATQVTVQTESEKQIDKLRRKEEKKNRRGTDHGTENDLSSFSF
SSLLQASEKKNILDDLVGHGDGAQSAATALPQGTVRKHYKGYEEVIVPPTPTAPLKPGEK
LIDIKELDDIAQAAFQGYKSLNRIQSRIFETTYYSNTNILVCAPTGAGKTNIAMISILHE
IGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLAPLNITVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLQQHYIGISEHNFAARN
ELMNEICFNKVVDSLRRGHQVMVFVHSRKDTGKTAEKLIDMAKLHEDFDLFTNASHPQQG
LIKKDVLKSRNRQLVQFFDYAVGIHHAGMLRADRGLTERLFSEGLLKVLVCTATLAWGVN
LPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYL
RLLTSQLPIESQFITSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGW
DEVVADPSLSLKQRALVSDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVET
YNELLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELETLARSCPLEIKGGPSNKHGKVS
ILIQLYISRGAIDSFSLVSDASYISSSLARIMRALFEICLRRGWSEMSSFMLEYCKAVDR
QIWPHQHPLRQFDRDISTEILRKLEERGVDLDRLYEMEEKDIGALIRYAPGGKLVKQYLG
YFPMVQLVATVSPITRTVLKVVLTITPEFIWKDRFHGTALRWWILVEDSENDHIYHSELF
TLTKKMAKGEPQKLSFTVPIFEPHPPQYFIRAISDSWLHSESFYTISFQNLMLPEAHTTH
TELLDLKPLPVTALANGTYEALYRFTHFNPIQTQAFHVLYHTDQNVLLGAPTGSGKTISA
ELAMLHLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVSQLGKHMVELTGEYTPDLTALL
SADIIISTPEKWDGISRNWHSRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERPVRFVGLSTALANAHDLADWLGVEEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRQFLAIPEESLQMI
VSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHL
VIIKGTEFFEAKSKRYVDFPITDILQMMGRAGRPQFDQHGKAIILVHEPKKSFYKKFLYE
PFPVESSLREQLHDHINAEIVSGTIRHKEDAIHYLTWTYLFRRLGVNPAYYGLEDIDPGT
LSSYLSSLVVSTFEDLEDGGCIKIEEDRVEPTMLGSIASQYYLKYTTVSMFASNIEADTS
LEVFLHVLSGASEYDELPVRHNEENHNAELASKVQYMVDKNLLDDPHVKTNLLFQAHFSR
VELPITDYVTDLKSVLDQSIRILQAMIDVCANSGWLSSTITCMYLLQMVMQGLWCDKDSS
LWMLPCMTDDLVSTLSQRGIFNVLQLLDVPLDSLHFLTKSSNSRLHEELQHFPRIQVRLK
VQKRTAADNSGARLNVRLEKTNRHKRTARAFTPRFPKLKDEAWWLVLANTASSHLYALKR
VSFKDVSTTNMDIPSDVKDFQGMKLIVISDCYLGLDQEYSIEQLV
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgttgatggaactcccgcgcttaaccaattctctcagatcaccattcgatgccgatcaa
gcgtatctcaatcgtaaatccttcctccaaaacctcaatcgcactagctctacagctgcg
tctggagagtcggaactggcgcgcaagatcatttatcggtgggatgaagcttcttttgag
gtgcggcaattgtacaagcaatttgtggtggctgtggttgagttgatgggtggtgaagtg
gtgtctgaggagttccaagaagttgcaataaaggcgtataggctattcagtgggacttct
gaatccgaagaggatgaaagggacagaataattttgtcaaaaaagttagagttgcaaaaa
cttgttggtcatactgtgttggatgcaaacatactgaaagttgcatcactggtggagagc
ctttcttctttgcagaacaaggaacatggatttgactatttacctgaactgacgagtgaa
ggcagtgaggacgtggaatttggagcagatcttgcattccaacctccagctcgctttcta
gtggatatttcaatagagaatggagaagattttttggaggaaactggcgcatcatcttcc
aatcatgatggatggtccaataatcttggccctgcgagttctcacactgctgtcggtgca
ggtaattatgacctagagtggttgagagatgcatgcgatagaattgtcagtgctagtact
tcacagcttcctcgagatgaactggcaatgacaatttgcaggattctcgattcagagaaa
cctggagatgagatcgctggtgatttgctggattttgttggtgatagctcgttcgaaatt
gttcaggaccttattatgcacagaaaggaccttgttgaaagcatccatcatggacttctt
gtcctgaaatctgatagatcaacttcaaacacacaaataaaatatcctagttatgctact
caggtaactgttcaaacagagtccgagaagcaaattgataaactccggcgcaaggaggag
aaaaagaataggcgtgggacggatcatggaactgagaacgacttgtcttcgttttctttc
agttccttacttcaagcaagtgagaagaaaaatatacttgatgatcttgtggggcatggt
gatggggctcagtctgctgccactgcccttcctcagggcactgtgagaaagcattacaag
ggatatgaagaagtcattgttccgcctacaccaactgcaccactgaaacctggggagaag
ctgattgacattaaggagctagatgacatagcacaagctgcttttcaaggttacaagtct
ttgaaccggatacagagcagaatattcgaaacgacttattatagcaacacaaatatactg
gtctgtgcaccaactggggctggaaaaaccaacatagctatgatttctattctacatgag
attggacaacactttaaagatggttatttgcataaagatgaattcaagatagtttatgtt
gctcctatgaaggcgttagctgcggaggtcacatcaacattcagccatcggttagcccca
ctaaacataaccgtgagagaacttactggtgatatgcaactctcaaaaaatgagcttgaa
gagacacagatgattgtaactactcctgaaaagtgggatgtcattactcgtaaaagcagt
gatatgtcactctccatgctcgtgaagctcctaatcattgatgaagtgcatttgttgaat
gatgacagaggtcctgttattgaagcattagtagctcgtactctacgtcaggttgaatct
acccaaagtatgatacgcattgttggcctttctgccactttaccaaattatctggaggtt
gcacaatttctgagagtaaatccagacactgggctattcttctttgactcaagctatagg
ccagtacctcttcagcagcattacatcgggatttctgaacacaactttgcagctcgtaat
gaactgatgaatgagatatgcttcaataaggtggttgattcactaaggcgaggacatcag
gttatggtttttgttcattcgcgcaaagacacaggaaaaactgctgaaaagctgatagat
atggccaaattacacgaggacttcgaccttttcacaaatgcttcacatcctcagcaggga
cttatcaagaaagacgtgttgaagtccagaaataggcaattggtccaattttttgactat
gctgttggcatccatcatgctgggatgctacgcgctgacagaggtctgactgagcggctt
ttctctgagggactattaaaggtactcgtatgcacagcaactttggcgtggggagttaat
ctgcctgctcatactgtggtgattaagggaactcaaatttatgacccaaaggctggtgga
tggcgagatctcggcatgcttgatgttatgcagatatttgggcgtgctgggagacctcaa
tttgataaaagtggtgaaggcattataatcacgagtcatgaaaaattagcctactatttg
cggcttttgacaagtcaacttcccattgagagccagtttataacctctttgaaagataac
ctgaatgccgaggtggcgttgggcactgtaacaaatgtcaaggaagcttgtgcttggctg
gggtacacatatcttttcataaggatgaaaatgaatcctctggcatatggcattggatgg
gatgaggtagttgcagatccatcactgagcctgaaacaaagagctctggtatcggatgcg
gcacgagctcttgacaaggcaaaaatgatgcgctttgatgagaaaagtgggaacttttat
tgtacagagcttggtcgcatagctagccacttttacattcattattctagtgtcgaaact
tataatgaattgttgagacgccacatgaatgatagcgaggtaattgacatggttgcacat
tcttctgaatttgaaaatattgttgttcgagaggaggaacaaaatgagctggaaacgtta
gctcgctcatgtcctttggaaatcaagggtggtccttcaaataaacatggaaaagtgtct
attcttatccagttgtacatatccaggggtgcaatcgattctttttcactagtttctgat
gcatcttacataagttcaagtttagcccgtattatgcgagctttatttgagatttgtttg
cggcgaggatggagtgaaatgtcttcattcatgctggagtactgcaaagctgtggatcgt
caaatttggccccaccagcatccactcagacagtttgatagagatatttctacagaaata
ttgagaaagcttgaagaaagaggggtggacttggatcgcctatatgagatggaggagaaa
gacattggagctttaattcgctatgcacctggtggaaagttggtgaagcaatacctggga
tatttcccaatggtccagttagttgctacagtaagtccaataacaagaactgttctaaag
gtggttttgaccattacacctgagttcatctggaaggatcgttttcatggtaccgccctg
cgctggtggattttggttgaggattctgagaatgaccatatataccactcagagctgttt
acattaacaaagaaaatggccaaaggggagcctcagaagctctccttcactgttccaata
tttgagccacatcctccccagtatttcatccgtgcaatttcagattcatggttgcattca
gagtctttctacactatatccttccaaaacctcatgctcccagaggctcatacgactcat
acggaactccttgacttgaaaccacttcccgtgactgcacttgcaaatggaacttatgaa
gcattgtacagattcacacattttaaccccatacagacgcaggcttttcatgtgctatat
cacacagaccaaaatgttcttcttggagctcctacaggaagtggtaaaaccatatcagcc
gagcttgccatgctccatctgtttaatactcagcctgatatgaaggttatctatatagca
cctttaaaggctctcgtgcgagaaaggatgaatgattggagaaagcggctagtctcgcag
cttgggaaacatatggtggaattgactggggagtatactccagatttgacagctctgtta
tcagctgacattataatttctaccccagaaaaatgggatggtatcagtcgaaattggcat
tctagatcctatgttaagaaggttgggcttatgatattggatgagattcatttgcttggg
gctgaccgcggacccatattggaggtaattgtatctcgaatgagatatatatcatcacag
acagagcggccagttcgatttgttggtctttcaacagctttagcaaatgcacatgatttg
gcagattggttgggtgttgaagaaattggtttattcaacttcaagcctagcgttaggcca
gttcctcttgaagttcatatccagggatatcctggaaagttttactgcccaagaatgaat
agcatgaataaaccggcatatgcagcaatatgtactcattcaccaacaaaaccggttctt
atatttgtgtcatctcgccgtcagactaggcttactgcattggacctcattcagtatgca
gcttcagatgagcacccaagacaattcttggctatacctgaagaatcgcttcagatgata
gtctcccaagtaactgatcagaaccttagacacactctgcagtttggtattggattgcac
catgcaggattgaatgataaggacagatcacttgttgaagaactttttgcaaacaacaag
attcaggtgttggtctgcaccagtacattagcttggggtgtaaaccttccagctcattta
gttatcataaagggaacagaattttttgaagcaaaatcaaaaagatatgttgattttcca
atcacggatattttacaaatgatgggtcgagctgggcggcctcagtttgaccagcatgga
aaagctattattctagttcatgaacccaaaaaaagcttctacaaaaagttcctctatgaa
ccatttccagttgaaagcagcctgagagaacagttgcatgatcacataaatgctgaaata
gtttctgggacaattcgtcataaagaggatgcaatacattatctcacctggacatatcta
ttccgtagattgggggttaatccagcatattatggcttagaggacatagatcctggaact
ctgagttcttacttgtcaagcttagtagtgagcacatttgaggatcttgaagatggtggt
tgcattaaaattgaagaagacagagtggagccaacgatgttgggttcaatagcatctcag
tattatcttaaatacacaactgtatctatgtttgcttcaaatatagaagcagacacatcg
ctggaagtttttctccatgtattgtctggtgcttctgaatatgatgagcttcctgttcga
cacaacgaagaaaaccataatgcagaattggccagtaaggttcagtacatggttgacaag
aatcttctcgatgaccctcatgtgaagacaaatcttctgtttcaggcacacttttcccga
gttgaactgccaatcactgactatgtaacagacttgaagtcagtgctggatcaaagtata
cgcattcttcaggcaatgatagatgtgtgtgcaaacagtggatggctctctagtacaatt
acttgtatgtatctcctacaaatggtcatgcagggtttatggtgcgacaaagattcctcc
ttatggatgcttccatgcatgacggatgatcttgttagtacattgagccagagaggaatc
ttcaatgttttgcagttattagatgttcctctggactctttacattttctcacaaaaagt
tccaattcgcggttacatgaggaactgcagcattttcctcgcattcaagtgcgattgaag
gttcagaagcgcactgctgctgataactctggtgcccgtttgaatgtgagattggaaaaa
acaaataggcataagagaacagcaagagcttttactcctcgctttccaaagcttaaagat
gaagcttggtggttggtcctggcaaataccgcctcctctcatctatatgcattgaagagg
gtttctttcaaggatgtgtcgaccacaaacatggatatcccatcagacgtgaaagacttc
cagggtatgaagttgatcgtcatttccgattgttatcttggtttggatcaagaatactct
attgaacaacttgtgtaa
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integrated database retrieval system
