Salvia splendens (scarlet sage): 121752604
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Entry
121752604 CDS
T07627
Name
(RefSeq) RING-H2 finger protein ATL43-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121752604
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121752604
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121752604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Zn_ribbon_IFT122_C
zf_RING_Vps8_fungal
zinc_ribbon_16
Prok-RING_4
ZTF17_helical
Motif
Other DBs
NCBI-GeneID:
121752604
NCBI-ProteinID:
XP_042003659
LinkDB
All DBs
Position
10:10761288..10762340
Genome browser
AA seq
350 aa
AA seq
DB search
MGMSKFFLIVSLIQTASSARRLAQEDEYYYQFPPPPPSSPILHTPSEVFKPGTTVIVASI
CTVFTITFVLLYVQRCRTASVSQAAIPLARVDSGVNRKVIQQLPLFRFASLRGQKDGLEC
AVCLTRFEAEEVLRLLPKCKHAFHVECVDTWLDQHSTCPLCRYRVRSEDVLLVDRYGGRH
KALHNYRLPAGQARHSSASASGNELRRRSSFDGWSSRRRRSGNLSRNISRRSEPLGAQGD
RDKHRLEHKIMVSDDGEEGQSKVPMEEEELYLRTEMLMADGEADDNHDEDEEQAAGGMRK
SRSDLGDRKGKEKEKEEEGIVKRLKEWIPQFQQQQKAPAKSTAASSSGTV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtccaaattcttcctcatcgtttccttaatccaaacagcatcctcagcaagg
agactcgcgcaggaagacgaatattactaccagtttccgccgccgccgccgtcatcaccg
attctgcacacaccctcggaggtattcaagccaggcacgacggtgatcgtggcttcaatc
tgcaccgtgttcacaatcaccttcgtgctcctctacgtgcagcgctgcaggaccgcgtcc
gtctcccaggcggccatccctctggctagggtggactcgggggtgaaccgaaaggtgatc
cagcagctgcccctcttccggttcgcctccctccgcggccagaaggacggcctcgagtgc
gcggtctgcctgacccggttcgaggcggaggaggtcctccgcctcctgcccaagtgcaaa
cacgcgttccacgtggagtgcgtcgacacgtggctcgaccagcactccacgtgcccgctc
tgtcgctaccgcgtccgctctgaggatgtgctcctcgtagaccgctacggtggccgccac
aaagctctccacaactaccgtctccccgccggtcaggcccggcactcctccgcctccgcg
tcggggaacgagttgaggaggcggtcgtcgttcgatgggtggagttcaaggaggcggaga
agcgggaatttgtcgaggaatataagcaggagaagcgaaccattaggggcgcaaggggat
agggataagcatcggctggagcacaagattatggtgtcagacgacggggaggaggggcag
agtaaggtaccgatggaggaggaggagttgtatctgaggacggaaatgctgatggccgat
ggggaggcggacgacaaccatgacgaagacgaggagcaggcggcgggagggatgaggaaa
agtaggagtgatctaggagataggaaagggaaagagaaagagaaagaggaagaagggata
gtgaagagattgaaggagtggattccgcagtttcaacagcagcagaaagcgcctgcaaaa
tctacggctgcttcttcttctggtacagtttag
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