Salvia splendens (scarlet sage): 121752980
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Entry
121752980 CDS
T07627
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121752980
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
121752980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Mg_chelatase_C
Motif
Other DBs
NCBI-GeneID:
121752980
NCBI-ProteinID:
XP_042004035
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Position
10:complement(4258428..4261860)
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AA seq
512 aa
AA seq
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MGVMTVSSSSGRIPLGLKARNLTRASSLKRLVVLSFKSNESKHVSLVAKRESLALPLETN
KDTRKISRKVKKRPERVKAVASPSILELDYGEAGAILEKLYKRSPGTDVSDEEVKIGRGK
RRRPLRRKSVETEEAEKEGEVSVVRSQKKGKRLNLEKRISIRMKKENEFVALAQNKKHRK
NDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLK
SDVGRELTDDEVAKKINMDVFHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGP
RFQDLCQAGVKGLMTGIDRFEPKRKFRLSTYGLFWIRHAIVRSLTLSSFTKVSFGLDSVR
VEIQRAKQELQFELQRMPTVEEITKRVGISPERYYEVMRASKPIASLHARHEVTNEEFIN
AITDVDGVEGDSRRQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKRDRTLGEIAGNLN
ISREMVRKHEVKALMKLKHPARVDYLRHYIYK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcatgactgtttctagttcttcaggacgaattccattgggattgaaagcgaga
aatttgactcgtgcatcctcattgaagaggctagtagtgttgtctttcaaatccaatgaa
agtaaacatgtatcattggttgctaaacgagaatctctagctttaccattggagacgaat
aaagatactaggaagatatcaaggaaggtgaagaagcgtcctgaacgagtaaaagcagtc
gcctctccaagtatattggagttggattacggcgaagcaggtgctatacttgaaaaatta
tacaagcgaagtcctggtacagatgtatcagatgaggaggtcaaaataggaagggggaag
agacggcggcctcttaggaggaagagtgtggaaactgaggaggcagagaaggaaggggag
gtgagtgtggtgagaagccagaaaaaggggaaaagattgaatctcgagaagagaatttct
attagaatgaagaaagaaaatgaatttgttgcattagcccaaaataagaaacatagaaag
aatgatgaagatgagaagattgataggcttgttagggagtatacttcttcgacggattta
gtcagtttagattggaagaaaatgaagattccgcctgttcttccttcgtctgagcacgcc
tggcttttcaaactgatgcaacctatgaaggaaatcctcaaagttaaggaaaccttaaaa
agtgatgtaggaagagagctaactgatgatgaagtagcaaagaagataaatatggatgta
tttcatctgcggaaacagttagaagttggtcgagctgccagaaataagttgatcaagcac
aacctgcggcttgttctatttgtcatgaataagtattttcaagactttgctaatggccca
agattccaagatctctgtcaagctggagtgaagggtcttatgactggtattgatcgcttt
gaaccaaaaaggaagttccgactctcaacatatggcctcttctggatcaggcatgccatt
gttcgctcattaacactgtcaagtttcacaaaggtctcctttggccttgactcggtcagg
gtagaaatccagagggccaagcaggagctgcaatttgagcttcagaggatgccaactgtt
gaagagattacaaaacgtgttggaatctcccctgaaagatactatgaagtgatgagggca
tcaaagcctattgcttctctccatgcacgtcatgaagtaaccaatgaggagttcatcaat
gccattactgatgttgatggtgttgaaggagatagcagaagacaaccagcacttctcaga
cttgctcttgatgatgtgcttgattctctgaaaccgaaggagagcttggtaatgaggcag
agatacgggctcgatgggaaaagagatagaacacttggagaaattgctgggaatttgaac
atttcaagagagatggttcggaagcatgaagtgaaggctctgatgaagctcaagcatcca
gctcgagtcgattacctccgccactacatttacaaatga
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