Salvia splendens (scarlet sage): 121753004
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Entry
121753004 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121753004
09124 Replication and repair
03420 Nucleotide excision repair
121753004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121753004
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121753004
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121753004
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121753004
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_3
Dsc3_N
MmeI_C
Ubiquitin_4
BLTP1_C
Motif
Other DBs
NCBI-GeneID:
121753004
NCBI-ProteinID:
XP_042004068
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Position
10:12031882..12035223
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AA seq
373 aa
AA seq
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MKLTVKTLKGSHFQISVHATDTIMAVKKCIEDVQGKDNYPCGQQLLIYNGKVLKDESTLA
DNKVSEDGFLVVMLSKSKSLSSSASTSSQPASTAAPSSNQAAPVSNPSPAPAPVAEAQPS
VPAPKITGPVSVAPLENDKSGSYEEAASSLVASDNIDHTIQQIIDMGGGSWDKETVRRAL
RAAYNNPERAVDYLYSGIPESTEVDVPLAQPPVDLMDSTGPPALGGPNSSPLNLFPQEAI
SGAGSLGFLRNNQQFQALRSLVQANPQILQPMLQELGKQNPSLLRLIQENHQEFLQLINE
PVDGSEGDIFDQADQDQDMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEELA
VNYLLENAGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaaaactctcaaaggcagccactttcaaattagcgtccatgctacc
gataccataatggctgttaagaaatgtatcgaagatgtgcaaggaaaagataattatcca
tgtggtcagcagttactgatttataatgggaaagtgttgaaagatgaaagtaccttagct
gataacaaggtctccgaagatggctttcttgttgtcatgctaagcaagagcaaaagcttg
agctcaagtgcgtcaacatcttctcagcctgcttccactgctgcaccatctagtaatcaa
gctgctccagttagtaatccttctccggctccggctcctgtagctgaagctcaaccatct
gtaccggctcctaagatcaccggaccagtttctgttgctccgttagaaaatgacaaatct
ggatcatacgaggaagctgcttccagtttagttgcttctgataatattgaccacactatt
caacaaattattgatatgggtggtggtagttgggacaaagagacagtgagacgtgctctt
cgagccgcatacaataatccagaaagagctgtcgattacttgtattcaggaatccctgag
agcacagaagtcgatgttccattggctcaacctccagtagatttgatggattcaactggt
ccaccagctttaggaggaccgaactcatccccattgaatttgtttcctcaggaggctatt
tctggtgctggatcccttggtttcctcaggaacaaccagcagtttcaagcactgcgttca
ctggttcaagctaatccacaaattctacagcccatgcttcaggagctgggaaagcaaaat
ccttcactcctgagactcatacaagaaaaccatcaggagttcctccaattaattaatgaa
cccgtggatggttctgaaggggatatattcgatcaggctgaccaggaccaggacatgcct
cacgccgtcagtgtcacacctgctgaacaggaggctatcgaaagaatggaagccatggga
ttcgatagagctcttgtgatcgaggcatttttagcttgtgaccgcaacgaagaactagca
gtgaactacttgttggaaaacgctggagattttgaagattga
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