Salvia splendens (scarlet sage): 121753104
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Entry
121753104 CDS
T07627
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121753104
03083 Polycomb repressive complex
121753104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753104
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121753104
Histone modification proteins
HAT complexes
HATB complex
121753104
HDAC complexes
Sin3A-HDAC complex
121753104
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121753104
PRC2.2
121753104
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121753104
Heterochromatin formation proteins
Other heterochromatin formation proteins
121753104
Chromatin remodeling factors
NuRD complex
121753104
NuRF complex
121753104
NuRF complex (fruit fly)
121753104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SPT8
WDR90_beta-prop_4th
Ge1_WD40
Ac81
Motif
Other DBs
NCBI-GeneID:
121753104
NCBI-ProteinID:
XP_042004216
LinkDB
All DBs
Position
10:18635950..18641222
Genome browser
AA seq
502 aa
AA seq
DB search
MESTPPRKRGRPKGSTTSTKGKGKDAAGTPSRIKPSAAHKKKPVVDEGYTRWKQVVPLLY
DWIASHNLTWPSLSCRWGPVLERGAQKNIQRLYLSEQLIPLMRSRVLKQHMETDRTQPNT
LIIANCDVVKCRVASESHIANINEDARSPHVKTYKTILHPGEVNRIRELHQNKNIIATHT
DCPEVFIWDVEAQPNRHAILGAEDSRPDLVLSGHQDNAEFALAMCRAVPFVLSGGKDKSV
VLWSIQDHVSTLANAGTQSAETASSIVKAADNSTVGPRGIFQGHTDTVEDVQFSPSSSQQ
FCSVGDDSCLIIWDARIGSDPVDKVEKAHDADIHCVDWNSHDENYILTGSEDNTVCMFDR
RNISASGVGIPVHKFSGHNAAVLSVQWSPDKCSVFGSSAEDGLLNIWDYEKVGQKEDTGS
DPDTPAGLFFKHAGHRDKVVDFHWNVDDPWTIASVSDDGEFADGGGTLQIWRMTDLLSRP
QDEVLAELEKFKDHVSECSKTS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcactccaccaaggaagcgcgggaggccgaagggatcaacgacatccaccaag
ggcaagggcaaagatgccgccggaacgccctccagaatcaaaccgtctgccgcccacaag
aagaagcccgtcgttgacgagggttacacccggtggaagcaggtcgtccccttgctttat
gactggatcgcctctcacaatctgacctggccctctctttcctgccgctggggtcctgtt
cttgaacgaggagctcagaagaacatacaacgactttacctgtctgagcagttaattcca
ttaatgaggtcaagagtgctaaagcagcacatggagactgaccgtacgcagccgaacact
ttgatcatagcaaattgtgatgttgtcaagtgccgtgttgcttctgaaagtcatatagcc
aatatcaatgaagatgcacgttcgccacatgtaaagacatacaaaactatattacatcca
ggagaggtgaacagaattagggaactgcatcagaacaaaaatataatagctacacacact
gattgtcctgaagtttttatttgggacgtggaggcgcaacctaatcggcatgctattctt
ggagctgaggattctcgcccagatttggtcttatctggacaccaagacaacgcagaattt
gctcttgcaatgtgccgagccgtaccctttgttctctctggagggaaggataaatctgtt
gtgttgtggagtatccaggatcatgtttcaacacttgccaatgctggaacccaatctgct
gaaactgctagttcaatcgtaaaggctgctgataattctacagttggcccacgtgggatc
ttccaaggccacactgatacagttgaggacgttcagttttctccgtcaagctctcagcaa
ttttgtagtgttggagatgattcttgtttgataatttgggacgcaaggattggaagtgat
ccggttgataaggttgagaaggcacatgatgctgatattcattgcgttgattggaattcg
cacgatgagaattatatactaactgggtctgaggacaatacagtttgcatgtttgaccgc
cgtaatatatcagcgagtggagtaggtatccctgtccataaattttcaggtcacaatgca
gctgttctctctgtccagtggtcacctgacaaatgctctgtatttgggagctctgcagaa
gatggcttgttaaacatctgggactatgagaaggttggtcagaaggaagacacagggtca
gaccctgatactccagcagggttgtttttcaaacatgctgggcacagggataaggttgtt
gacttccattggaatgttgatgatccatggacaattgctagtgtatctgatgatggggaa
ttcgcggatgggggtggtactcttcagatttggcgtatgacagatcttctatcccggcct
caagatgaagttttggctgagcttgaaaaattcaaagaccatgtgagtgagtgctccaag
acttcttga
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