Salvia splendens (scarlet sage): 121753148
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Entry
121753148 CDS
T07627
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121753148
03041 Spliceosome [BR:
sspl03041
]
121753148
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121753148
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121753148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
121753148
NCBI-ProteinID:
XP_042004276
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All DBs
Position
10:complement(23693400..23700704)
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AA seq
404 aa
AA seq
DB search
MQQLQQQRLKQQQQPLYHPGLLAPTQIEPVLSGNLPPGFDSSTCRSVYVGNIHPQVTEPL
LQEVFSGTGPLEGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYAS
AQREDTSNHFNIFVGDLSPEVTDATLFACFFVYPTCSDARVMWDQKSGRSRGFGFVSFRS
QQDAQSSINDLNGKWLGSRQIRCNWAAKGAGQGDEQQNPDSKIVVELTNGASDDSLEKRN
EDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGVGVIEDVRIQRDKGFGFIRYHSHAE
AARAIQVGNARLLFGKPVKCSWGSKPTPPGTSSNPLPPPALPHMPGFNAADLVAYERQIA
LNKLGAAQALMNSQAHRLGAASQHMYDGGYSNVATNRQPLYYQQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctgcagcagcaaaggttgaagcagcagcagcagcccctttaccatcccggt
ctcctcgctcctactcagatagaacctgtcctgagtgggaatttgcctcctggattcgac
tcaagcacatgccgcagtgtgtatgttggaaatatccacccgcaagttactgaacctctt
cttcaggaggttttctcaggcacaggtcctcttgaaggttgcaagctcattcggaaagaa
aagtcatcctatggttttgtggattactttgatcgtcgatcagctgcactagccatagtg
actcttaatggcagacatttgtttggtcagccaattaaagtcaactgggcatatgctagt
gctcagcgcgaggacacatcaaatcacttcaacatatttgttggcgatcttagcccggag
gttactgatgctaccttatttgcatgcttctttgtatatcctacttgctcagatgctagg
gtaatgtgggaccagaagagtggccgctcaaggggttttggatttgtttcttttcgcagt
cagcaggatgctcaaagttcaataaatgacttgaatgggaagtggcttggaagcagacaa
attcgctgcaattgggcggcaaaaggtgctggtcaaggcgatgagcagcagaatcccgat
tcaaaaattgttgtggaactaaccaatggagcatctgatgacagcctagaaaaacggaat
gaagatgctccagaaaataatccacagtatacaactgtttatgttggaaatcttgctcct
gaagtcacatcagtcgatctccaccgccatttccatgcacttggagttggagtgattgaa
gatgtccgcattcagagagacaaaggttttgggttcataaggtaccacagccacgctgaa
gctgctcgtgccatccaggtgggaaatgctcgccttcttttcggcaagccagttaagtgc
tcgtggggtagcaagcccacccctcccgggacgagctcaaaccctctgcctccaccagca
ttaccacacatgcccggtttcaacgctgctgacctggtggcctacgaacgacagattgca
ctgaataaactaggagctgctcaagccctgatgaattcgcaggcccaccgtcttggtgct
gcctcccaacatatgtacgatggtgggtattcgaacgtggctacaaaccggcaacccctc
tattaccagcaataa
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