Salvia splendens (scarlet sage): 121753173
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Entry
121753173 CDS
T07627
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121753173
Spliceosome [BR:
sspl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121753173
Other components
Complex C specific factors
121753173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
121753173
NCBI-ProteinID:
XP_042004307
LinkDB
All DBs
Position
10:11442967..11446480
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AA seq
846 aa
AA seq
DB search
MDEYQERERFGMDNDYDDGQWIGGEFYGKRRQKRVQTKDDVLYGVFASCDSDSDEGFGSK
NKRRKDSSKKTDYSKPVSFISTGTVMPSQEIEHNIKEDNDVMEEEDVTPAGLGLGFGSAD
SKKANEDKEEDDDFLPTAFGKIIREGAKLREEKEKEKARAAKKSSQASKRDLDPNGVGEF
EKHTKGIGMKLLEKMGNKGGGLGKNEQGITAPIEAKLRPKNMGMGFNDYKEAVRPAIQDV
DEKSVPRPSHSLEGRTNEKLWSKKISKKKAYITAAELLAQKEEKGFEVVQKVFDMRGPQV
RVLTNLENLNAEEMARENDVPMPELQHNIKLIVDIIEHDIQKLDSNLRNERETVVALQKE
KEKLQKEAHDQKQRLGNMEDIIAVLDQLGEKSSTGLLTLESLAKSFVDLQTRFPDEYTLC
NLSCIACSHALPLFIRIFQGWDPLQNPTHGTEVVSLWKTLLQGKDSLNFSSTASPYVQLL
MEVVFPAVRISGTNSWQARDAEPMLRYLDSWEELLPPSILQAILDNVVMPKISAAVDSWD
PRRETIPIHEWIHPWLPLLGHKFENCYHTIRNRLASVLHAWHPSDGSAFAILSPWKTVFD
PASWEHLMVRYIIPKLLIVMHEFQINPANQSLDQFNCVVKWVSAIPTHHMLQLMDVFFNK
WQEVLYHWLCSEPNFDEVTQWYLNWKELLPQELQANEHIRYRLNLGLAMMNQAVEGMEVA
PPGLKENISYLRAREQRQFETQKKAAAQAQHRTVPSSDNEIPAEGISGGNEISLKEVIEI
HAQQNGLLFKPKPGRMHDGHQIYAFGNICIIIDSLNQKVFSQTEDRWSLVSLEQLLELQS
RSKMRR
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaggagagggaaaggttcggcatggataatgattatgatgatggccag
tggattggtggcgagttttatggcaagcgcagacagaaacgtgtgcagaccaaagatgat
gttctttatggtgtgtttgcttcttgtgatagtgactctgacgaggggtttgggtcgaag
aacaagcgcaggaaggattcgtcgaagaagactgactactctaagcctgtcagttttatt
tcgactggcacagttatgcccagtcaggagattgaacataatatcaaggaggataatgat
gtaatggaggaggaggatgtcacacctgctggtttaggccttggatttggttctgctgat
tcgaaaaaggcaaatgaagacaaggaagaagatgatgacttcttgcctactgcatttggg
aagattatcagggaaggtgcgaagttgcgggaagagaaggaaaaggagaaggctagggca
gccaaaaaatcatctcaagctagcaagagggacttggacccaaatggtgttggtgaattt
gagaagcataccaaaggtattggaatgaagttgcttgagaagatgggcaacaagggtggc
ggtcttggtaaaaacgagcagggaattacggctcctattgaggccaagctccggcctaag
aatatgggaatgggttttaatgactacaaagaagccgttcgtccagcaatacaggacgta
gatgaaaaatctgttccacgtcccagccattctctagaaggtcgcactaatgaaaagctt
tggtcgaagaaaatttcaaagaagaaggcttatataacagctgcagaactgttggcccag
aaggaagagaaaggttttgaagttgttcagaaggtttttgacatgagagggccacaagtt
cgggttttgacaaatttggaaaacttgaatgcagaagaaatggccagggaaaatgatgtc
ccaatgcccgaacttcagcataatatcaaattgatagttgatataattgagcatgacatt
cagaaacttgatagtaatctgagaaacgaaagggagactgtggttgctttacagaaggaa
aaggagaagctgcaaaaggaggctcatgaccagaaacaacggcttggaaacatggaggat
ataatagctgtattggaccaattgggtgagaagagctctacaggattgttaactttagaa
tcacttgctaaatcatttgtagatttacagacaagatttccggatgagtacacattatgc
aacttatcttgcatcgcgtgctcgcatgctctgcctctatttattagaatatttcaggga
tgggacccactccagaatccaactcatggaactgaggttgtatcattgtggaagacactg
ttgcaaggtaaagattctttgaatttctcaagtacagcttctccatacgtgcagctgctt
atggaagtcgtatttcctgctgtaagaatatctgggaccaactcttggcaggcaagggac
gcagagcccatgcttaggtatttggattcttgggaagaacttttgcctccttctatccta
caggccatactcgacaacgttgttatgccaaaaatatcagctgctgtagactcgtgggat
ccacgtagagaaactattcccatccatgagtggatccacccttggttaccattgttgggt
cacaagtttgagaattgctatcacacgattcgcaatagattggccagtgttcttcatgct
tggcacccaagtgatggatcagcttttgccatattgtctccttggaagactgtgtttgat
cctgccagttgggagcatttaatggttcggtacatcattccaaaactgttgattgtcatg
catgaattccagataaatccagccaatcagagtctcgatcaatttaattgtgtcgtgaaa
tgggtgtctgctattcctactcatcacatgctgcagttaatggatgttttctttaataag
tggcaagaagtgctttatcattggttgtgttccgaaccaaattttgacgaagtgacccag
tggtatctcaactggaaagagctccttcctcaagaacttcaggcaaatgagcatatccgg
tataggcttaatcttggtttggccatgatgaaccaggcagttgaaggcatggaggtggct
ccccctggattgaaagagaatattagctatctcagggcgcgcgagcaaaggcagtttgaa
actcagaaaaaagctgctgcacaagctcaacataggaccgtgccaagttcggataatgaa
attccagcagagggcattagtggtggaaacgagataagcttgaaagaagttatcgaaatc
catgctcagcaaaatggtttgctgttcaagcccaaacctggtagaatgcatgatgggcat
caaatatatgcatttggtaatatatgcataattatagactccctcaaccaaaaggtgttt
tcccagactgaggacagatggtccctcgtatcacttgagcagctgctggaattgcaaagt
cgttccaagatgaggcgataa
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