Salvia splendens (scarlet sage): 121753310
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Entry
121753310 CDS
T07627
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753310
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
121753310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Ctf4_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_ELP1_1st
Beta-prop_HPS5
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
121753310
NCBI-ProteinID:
XP_042004501
LinkDB
All DBs
Position
10:17363447..17369470
Genome browser
AA seq
964 aa
AA seq
DB search
MKIRTMKLREAHTAADDSVCSILWASDAGHIVTASSSDNAICIHDASAPSNAPKYLRNHR
EGVTALALSPNSTCLASGSLDHSVKLYKFPGGDFETNITRFTLPIRAVAFNKSGTILAAA
GDDEGIKLVNTIDGTIARVLKGHKGSVTSLAFDPKTEYLTSLDSNGTVIYWELQSGSTLH
VLKAIAPNNGTDVSVMNILAWSPDGELLAVPGLKNNVVLYDRDTAEKLFSLSGDHLQPIC
FLSWSPNGKYIATSGLDKQILIWDVDKKQDIERQKFSECITCMAWKPEGNALAVIDVKGK
YGVWESVIPSTMKSPTEDIPGLYSKNSNGLLLFDEEEEPCASGNLSDLNEDSHNDFEPLR
RKRSRKHSSYDDEMEDVNDELETVSKVETRKKAFYGHKENLSGKSGSRNMMVTAGTKMQE
PFQPGSTPAQPGKRHFLCYNMLGSVTTVEHEGSSHIETDFHDTSSGPRVSAMTDYFGFTM
ASLNENGSVFANPCKGDKNMSTLMYRPFSSWANNSEWSMRFEGEEVRAIALGSGWVAAIT
NLNSLRIFTEGGLQRYILSLDGPVVTAAGYKDELAVVTHISPPLPTNEQILEFRVFNISH
GSQPLRGRLPLTPGSNLTWFGFSEEGQLSSFDSKGILRVFTSQFGGTWLPLFSASKIKKP
EENYWVAGLNASKLFCIVCKSPETFPQSTPKPVLTLLDLSFPLAASDLGADSLENEFMMN
NMHISRIQRSIEEREASGLDCTLLDDEAFTVETSLDRCILRLIASCCNSDKHVRATELFK
LLSLEKSSRAAIKLVTALKQPNLAERFNNILEEKLLSEKKENIALPDSKSNCNGSIKPEV
ASTKFFTTEINRAAETAVASPVHTFPSTSNTRARNSEEPIKDRNGKSEESKTTTPGRTID
LKATGKGKANGVHNAGEATKATKFDQLSSSRPSNPFAKSSSNQGSPSLFDSLKKAKKTDV
KGKV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccggacgatgaagctccgagaagcccacacggctgccgacgattccgtctgc
tccattctgtgggcatccgatgctggccacattgtcaccgcctcttcctccgacaacgcc
atctgcatccacgatgcctccgcgccttccaatgcccccaagtatcttcgcaaccaccgc
gagggagtcacggcgctggctctcagccctaattccacctgccttgcttctggctccctt
gaccactcggtcaagttatataaattccctggtggagattttgaaactaatatcactaga
ttcaccctgccaattcgtgctgttgcttttaataagtcgggaacaattttggctgctgct
ggtgatgatgagggcattaaacttgtcaatactattgatggaaccattgcaagagtactt
aaagggcataaaggatctgtcactagcctggcttttgatcctaaaactgaatacttaact
tcacttgattcaaatgggacagtcatttactgggagctccaatctgggagtacacttcat
gtccttaaggctattgctcccaacaatggtacagatgtctcagtaatgaacatacttgca
tggagtccagatggagaattgttagcagtaccaggtctgaaaaataatgtggtgttgtat
gacagggacactgctgagaagcttttttctcttagtggtgatcatttacagcctatttgc
ttcttatcatggtctcctaatgggaaatatattgctacttctggtttagacaagcaaatt
cttatttgggatgtggataagaaacaggacattgagaggcaaaagtttagtgaatgcata
acttgcatggcgtggaagcctgagggaaatgcattggcagttattgatgttaaggggaag
tatggtgtgtgggaatcagttataccatcaacaatgaaatctccaactgaagatattcct
ggtttatattccaaaaacagcaatggcctcctcttgtttgacgaagaagaagaaccttgt
gcatcaggtaatttaagtgatctcaatgaagatagccataacgactttgagccacttaga
agaaagagatcccgtaagcactctagttatgatgatgaaatggaagatgttaatgatgag
ctggaaactgtttctaaagttgaaacacgtaagaaggctttttacggtcataaagaaaac
ctctctggaaagagtggatctagaaatatgatggtaactgcaggaactaaaatgcaagaa
ccttttcagcctggatctacacctgcacagcctggaaagaggcactttttgtgctacaat
atgctagggagtgtaaccacggtggaacatgaaggatcttcacatatagagacagatttc
catgataccagcagtggtccacgtgtatctgcgatgactgactattttggttttacaatg
gcttctctaaatgagaatggcagtgtatttgctaatccatgcaaaggtgataagaatatg
agtacactcatgtatcgcccctttagtagctgggcaaataacagtgagtggtctatgcgg
tttgagggggaagaagtaagagcaatagcacttggaagtggttgggttgctgctatcacc
aaccttaattctcttcgtattttcactgagggtggtttacagaggtacattctctctctt
gatggaccagtggttacagctgctggctacaaagatgaactggcagttgtaactcatatt
tctcctcctctgccaacaaatgaacagatccttgaatttagagtcttcaacatttctcat
ggatcacaacctttaagaggacggcttccattgactcctgggtcaaacttaacatggttt
ggtttcagcgaggaaggtcaactaagttcttttgattctaagggtatcttgagagtcttt
acaagtcaatttggaggtacttggttgccacttttcagtgccagcaaaataaagaagccc
gaggaaaattattgggttgctggcctgaatgcaagcaagttattttgcattgtttgcaag
tctcctgaaactttcccacagtctactcccaagccagtgctgaccttgctagacctgtca
tttcctcttgctgcttcggacctcggtgcagacagcttggagaatgaatttatgatgaat
aacatgcatatctcaaggatccaaagaagtatagaagaaagagaagcttctggtcttgat
tgcaccttacttgacgacgaggctttcactgttgaaacttcccttgacagatgcatcttg
aggctcattgcatcctgctgcaacagtgacaaacatgtcagagccactgaactttttaaa
cttctatcactcgaaaaatcaagtagggcagccataaaacttgttactgcattaaagcaa
ccaaatttggctgagcgcttcaataatatactcgaggaaaagttgctcagtgaaaaaaag
gagaacattgcactccctgacagcaaatccaattgcaatggttctatcaaaccagaagtt
gcatctactaagttctttactacagaaatcaatagagcggcagaaactgcagttgcatct
cccgtccacacatttccatccacttccaacacaagggcgcgaaactctgaggagcctatc
aaggacagaaatggaaagagtgaagaaagtaaaactacgacaccaggaagaactattgac
ttgaaggcgacagggaaagggaaagctaatggagtgcacaatgctggagaagcaacgaag
gctacaaagtttgatcaactaagttctagtcgcccatctaatccattcgcgaagtcatcc
agcaaccaaggaagtccgtccttgttcgattctttaaagaaggcaaagaagactgacgtc
aaggggaaggtatga
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