Salvia splendens (scarlet sage): 121753414
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Entry
121753414 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121753414
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753414
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121753414
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121753414
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121753414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
121753414
NCBI-ProteinID:
XP_042004649
LinkDB
All DBs
Position
10:19061686..19066525
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AA seq
632 aa
AA seq
DB search
MQFGDGLAHEFCQEEKMRFDNNNEGEEDPNALTKFRISKALRDTLKDKGIESLFPIQAMT
FNTILDGSDLVGRARTGQGKTLAFMLPILESLTNGLAKTSWMTGYGRPPSVLVLLPTREL
ATQVFTDFEIYSGSLGLKCCCLYGGSPYQPQQIQLKRGVDIVVGTPGRIKDHIDRQTIDL
SALKFRVLDEADEMLRMGFVEDVELILGKVEDASRVQTLLFSATLPEWVKHYSQSQISAK
FLKQDKKTTDLVGNEKMKASTNVRHIVLPCSGSARSQIIPDIIHCYSSGGRTIIFTETKD
SASTLAGLLPGARALHGDIQQATREVTLSGFRSGKFSTLVATNVAARGLDIDDVQLIIQC
EPPRDVEAYIHRSGRTGRAGKTGIAVMLYDPRKSNFSKIERESGVKFEHMSAPQPADIAK
VAGAEAAEKIAEISDRVIPVFKDAAEELVKSSVLSPAELLAKALAKIAGYTEIKSRSLLT
SMENYVTVLLECGKPIYTPSFVYGVLRRFLPEEKVESIRGLSLTADGKGAVFDVATEDLD
QFIAEPKNHSGVSLEVVKSLPRLQEREQVRGGGRFGGGGGGRGGGGYLERRDGRLSSGRG
GGRGGFPDRRNDRFARGGGGGGRGRANNNRRW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcggagatgggctcgcccatgaattctgtcaagaagaaaagatgaggttcgac
aataataacgagggggaggaagatcctaatgcgctgacgaaatttcggatttccaaggcg
ttgagggataccctcaaggacaagggaatcgagtccttgtttccgattcaggccatgacc
ttcaataccattctcgatggttctgatttggttggtagggcacgcactggtcagggtaaa
acattggcttttatgttgcccatattggaatcgttgacgaatgggcttgcgaaaacatca
tggatgactggttatggaaggccaccaagtgttcttgtgcttttacccactagggagctg
gccactcaggtgtttactgattttgagatatacagcggatcattagggttgaaatgttgc
tgtctgtatggtggttcgccataccagccacagcagattcagttgaaaagaggtgttgac
atcgttgttggtactcctggtcgcattaaggatcacatagatagacaaacgattgacttg
agtgcactaaagttccgtgtacttgatgaggctgatgaaatgctgaggatgggttttgtt
gaagatgttgaacttatcttgggcaaggtagaggatgcaagtagagtccaaacacttctt
tttagcgctactttaccagaatgggtgaagcattactctcaatcccagatttcagcaaaa
tttctaaaacaagataagaaaactactgatcttgttggaaatgagaaaatgaaggctagc
accaacgtgagacatattgttcttccctgctctggctctgccagatcccaaattattcct
gatattatccactgctatagtagtggaggtcgcactattatctttacggagacaaaggat
tctgcttccacactagctggattactacctggagcacgtgctttgcacggtgacatacaa
caggctacacgtgaggtcacactttctggattcagatccggaaaattttcaacccttgtg
gctacaaatgtagcggcacgtgggttagatattgatgacgtccagctaattattcagtgt
gaaccacctcgcgatgtagaggcatacattcatcgctctggaagaacaggaagagcaggg
aaaactggaattgctgtaatgctttatgatccaaggaagtcaaacttttcaaagatagaa
agagaatctggggtgaaatttgaacatatgtcagctccacagcctgcagatatagctaaa
gttgctggtgcagaagctgctgagaaaatagctgagatatctgatagggtcatacctgta
tttaaggatgctgctgaagagctagtgaagtcatctgtcctgtccccagcagaattgcta
gcaaaggcactggcgaaaatagctggctatactgaaattaagagtaggtcacttctcact
tcaatggaaaactatgttactgttcttcttgagtgtggaaagcccatttacacaccttcc
tttgtctatggtgttctccgaagatttctaccagaagagaaagtcgaatcaatcaggggc
ctttcgttgaccgctgatggcaagggtgcagtgtttgatgtggctactgaagatctggac
cagtttattgctgagccgaaaaatcattctggggtaagcctggaggtggtgaaatcattg
ccccgattgcaagaaagagagcaggtaagaggaggggggaggtttggaggtggaggtgga
gggcgtggtggtggtggttacctggagagacgagatggtaggttatccagtggaagagga
ggcgggagaggaggatttccagatcggaggaatgatagattcgctagaggcggtggtggt
ggtggaagaggtcgtgcgaataacaaccgtagatggtga
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