Salvia splendens (scarlet sage): 121753532
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Entry
121753532 CDS
T07627
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121753532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121753532
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753532
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121753532
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121753532
PBAF complex
121753532
GBAF(ncBAF) complex
121753532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
DUF1664
ADIP
RhiE_B
Methyltransf_30
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
121753532
NCBI-ProteinID:
XP_042004667
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All DBs
Position
11:26119611..26122647
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AA seq
447 aa
AA seq
DB search
MAAETTPPPKPSPVTPAASAADRPPPSAVTPTAPSSITSRLNEPDADVIHIPSYSRWFSW
NAVHECEARFLPEFFDGRSPSKNPKIYKYYRNAIIRRFRENPSRKITFTEMRKTIVGDVG
SIRRVFDFLEAWGLINYAGSTSRPQLKWEDKDTKSAAAQGGGDVAVTKKRVCSGCKTPCT
IACFESEKHDMTLCARCYVRGNYRVGLSSADFKRVEITEKAMSDWSDKDTLQLLEALMHY
GDDWKKVAEHVGGRTAKECVAHFIKLPFGEQFDGPPESRELDTELGLQNAAMATKRMYLS
PLADASNPIMAQAAFLSTLVGVDVAEVAARAAVTAISDVGNLKQQESGYASNGNTLTNME
ESLGEAKLQLEKEEEELEKTISGIAAQTKEIEDKIFHFEEYDLQMERKLQQFQQLQKLLF
VDKLTILFHKNAAAKSGGNAAEPVKID
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaaacgacgccacctcctaaaccctctcccgtcactccggcagcctccgcc
gccgaccgtccacctccttccgccgtcacacctaccgctccgtcctccatcacttcccgc
cttaacgaacccgacgccgatgttattcacattcccagctactctcggtggttttcgtgg
aacgccgttcatgaatgcgaggctagattcctaccggagttcttcgatgggaggtcgccg
tccaaaaaccctaagatttacaaatattacaggaatgccatcatacggcggttccgggag
aatcctagccggaaaatcactttcaccgagatgcggaagacgattgtgggtgacgtgggg
tccattcgtagggttttcgatttcctggaggcttggggcttgattaattacgccggttct
acttcgaggcctcagctgaaatgggaggataaagatactaagtccgccgcagcgcagggc
ggtggcgatgttgctgtgacgaagaagagggtttgcagtggttgcaagaccccttgtacc
attgcttgctttgagtctgagaagcacgatatgacactttgtgcgaggtgttatgtgcgg
ggcaattatagggtgggcttgagttcagcagattttaagcgggttgagatcactgaaaag
gcgatgtcagactggagtgataaagacaccctgcaacttcttgaagctctcatgcattat
ggtgatgattggaagaaagtagcagagcatgttggaggaagaactgccaaggagtgtgtg
gctcactttataaagcttccatttggcgagcaatttgatggtcctccggaatccagagag
ctggatactgagttaggtttacaaaatgcagcaatggccacaaagaggatgtatctttct
ccacttgctgatgctagcaaccccattatggcacaggctgcttttctctctacattggtt
ggagtagatgttgctgaagtggcagcacgtgctgcagtaacggctatatctgatgttggt
aacttgaagcagcaagaatctggatatgcatctaatggtaataccctgaccaatatggaa
gaatctcttggtgaagcaaaattgcagctggagaaggaagaggaggagctggagaagacc
atatctggaattgcagcccagacaaaggagatcgaggacaagatttttcactttgaggaa
tacgatttacaaatggagaggaaattgcagcagttccaacagctccagaagctgctattt
gttgataaactaactatactgtttcataaaaatgcagcagcaaaaagtggaggcaacgca
gcagagcctgttaagattgattga
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