Salvia splendens (scarlet sage): 121753615
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Entry
121753615 CDS
T07627
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121753615
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753615
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121753615
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121753615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
121753615
NCBI-ProteinID:
XP_042004768
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Position
11:complement(28903799..28917137)
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AA seq
840 aa
AA seq
DB search
MADSETLVSAQSTSLEEDSNTNDVLMPDAKNPTQGSDSDSESESDSDSEDESQAKAQIEA
LETQLYNNPSDYDTHVQYIKALRKQGELEKLSQAREAMSSVFPLTPDMWREWAKDQTTVS
SSLEALPQIEKLYERGVSDYMSVDLWCDYLNFVQEHDPSVKECSAVGISKARNLFERALT
AAGLHVDGGHHIWELYREFEQAIIFTIDETDSAAKEKQIQRVRNLFHRQLSIPHTDLKST
LAAYQAWEADQGHLSNANNKELDDLPSHVVSVYQKALEMLNDRAHLEENISKSNTDSEKL
QDFMTYLKFEHSFGDPARIQILYERAIAVFPVSADLWLDYTQYLDKTFKTARIVRDSYYR
ATRNCPWVGELWVRYLLALERCHASEEELSTVFERSLLCTFSGFDEYLNVFLTRADGLRR
RISSSTAVKDEVDYTIIRDVFQRASDYLSPHLKNTESLLRLHSYWARLELKYGKDLTAAR
GVWESLLKICGSMMEAWQAYIAWEIETGNINEGRSLYKRCYSKRFPGTGSEDICHSWLRF
EREYGSLEEFDIAVQKVSPRLQELQLFRSQQESKNGIPAANERENPPKKSAREKRKPTSH
LVEEQPPAKHHKSAAQNSNKKNQNDKSQPRQSAEPSEAAELKNKNAERAKNQEIDKSSKK
SIQFNDQCTAFVSNLNLQATADDLHNFFADAGGVVAVRLLKDKFTRKSRGLAYVDFSDDA
HLAAALQKNKQIFMGKKLSILKSDPKQGRKKEVAGRSGRAEPGRTDTREIPKGKIDIQPQ
SPTSGHDDVQLKGRNTFAVPRNVKPLGWSSRSAPPSDAANEQEADNPKSNDEFRKMLMKS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgaaaccctagtttctgctcaatcgactagcctagaagaagacagcaac
acaaacgatgttttgatgcccgacgctaagaaccctactcaaggctccgactccgactca
gaatccgaatcggactccgactctgaagatgaatcccaggcgaaggctcaaattgaagca
ctagaaacacagctctacaataatccatcggattacgatactcatgtccaatatatcaaa
gctctgcggaagcaaggggagttagagaagctgagtcaagcaagggaagcaatgagttct
gtattcccactgactcctgatatgtggcgcgaatgggctaaggatcaaactactgttagc
tcctcgctagaagcactccctcagatcgaaaagctgtatgaacgaggagtttctgattat
atgtctgttgacctttggtgtgactacttaaattttgtacaagaacatgatccttccgtc
aaagaatgttctgccgtgggcatctcgaaagcaagaaatctatttgagcgtgcacttact
gctgctggcttgcatgttgatggaggtcaccacatatgggagctgtacagagaatttgaa
caagcgattatttttactattgacgaaactgactctgcggcaaaagaaaagcagatccag
cgcgtgcgaaatttatttcatcgtcagttgtctattccccataccgacctaaaatcaaca
cttgctgcttaccaggcctgggaagctgatcaagggcatctcagtaatgctaacaataaa
gagttagatgaccttccatctcatgttgtctctgtatatcagaaggcattggagatgctg
aatgaccgagctcatctagaagaaaatatttccaagagcaatacagattctgaaaaactt
caagatttcatgacttacttgaaatttgagcactcatttggtgatccagcacgtatacag
atcttgtatgaacgggctatagccgtgtttcctgtatctgctgatctatggcttgactat
acacagtatctggataaaacattcaagactgccagaattgtgagggacagttattatagg
gccacaaggaactgtccttgggtgggtgaattgtgggttcgatacttgcttgccctggaa
cgttgtcatgcttctgaggaagagttatcaacagtatttgaacgatcactgctgtgcact
ttttcaggatttgatgagtacctaaatgtattcctcacaagagcagacgggctaaggcgg
agaatatcttcatctacagctgtgaaggatgaagtggattatacaattataagggatgta
tttcagcgtgcatcagattacctatccccacatctcaaaaacacagaaagcttacttcgc
ttgcacagttattgggctcgactggagttgaagtatggaaaagatttgactgcggctcgt
ggtgtctgggagagcttgcttaaaatatgtgggtctatgatggaagcttggcaagcttat
atagcatgggagattgagacgggcaatataaatgaaggcagatccctttacaagagatgc
tatagtaagagattccctggaacaggctcagaggatatttgccattcatggctgcgcttt
gagagagaatacggatcactggaagagtttgatattgctgttcaaaaggtgtctcctcgt
cttcaagagttgcagctgtttaggtctcaacaggagagcaaaaatggcattcctgcagca
aatgagagagaaaatccacccaagaaaagtgcccgggaaaagaggaagccaacttcacat
ttagtagaagaacagccaccagctaagcatcacaaaagtgcggctcagaactccaacaaa
aaaaatcagaatgataaaagtcagccaaggcaatcagctgaaccaagtgaagctgctgag
ttaaaaaacaaaaatgcagaacgtgctaagaaccaggaaatagataaatcctctaaaaag
tctatccaatttaatgatcaatgcactgccttcgtttccaatctgaatctccaggcaact
gctgatgatctgcataatttctttgctgatgctggtggagttgttgcagttcgattacta
aaggacaaatttaccagaaaatcaagagggttggcatatgtggatttctcagacgatgca
caccttgcagcggctttacaaaagaacaaacaaatctttatgggcaagaagttaagcatt
ttgaaatcagatcctaagcaaggcaggaagaaagaagttgctgggcgcagtggcagagca
gaacctggcagaacagacacacgagagattcccaaggggaaaattgacattcagccacag
tctcccacttctgggcatgatgacgttcagctgaaggggaggaacacatttgcagtacca
agaaatgtgaaacctctcggttggagcagtcgaagcgcaccaccatctgatgcagctaat
gaacaggaggccgataaccccaaatctaatgatgagttcaggaagatgctaatgaaatca
tga
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