Salvia splendens (scarlet sage): 121753773
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Entry
121753773 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121753773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121753773
03036 Chromosome and associated proteins [BR:
sspl03036
]
121753773
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121753773
Coactivators
SAGA/TFTC/STAGA complex
121753773
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121753773
STAGA complex
121753773
TFTC complex
121753773
SAGA complex
121753773
SLIK complex
121753773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
121753773
NCBI-ProteinID:
XP_042004956
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All DBs
Position
11:5203154..5208195
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AA seq
540 aa
AA seq
DB search
MSIVPKETIEVIAQSIGISNLSPDVLPALAADVEYRIREIMQESIKCMRHSKRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFKRAAGHKDLFYIEEKDVEFKEVIEAPLPKAPLDTTV
VAHWLAIEGVQPAIPENPPPEALQMLSLPADNRKTEVKEDGASVDIKLPIKHVVSQELQL
YFEKITELTVTRSESPLFKAALVSLATDSGIHPLVPYFTLFVADEVSRNLNNFSLLFALM
RLVRSLLRNPHIHIEPYLHQLMPSVLTCLVAKRLGNKFSDNHWELRNFTASLVASICKRF
GQVYYNLQPRVTKTMLTAFIDPSKTLPQHYGAVRGIAALGANVVRLLILPNLDPYLRLLE
PEMQLEKQKNEIKRHEAWLVYGALLRAAGLCVYDRLKMLPSLPSPPARTVCRSNSKVVTT
SSNKRKTTMDNMMHQPPLKKLATDSSMGANSLPADIAGASGGYSTNTGAADSSRASGKNN
VAGSSSRREIVGGQGFKTSSALEQAWKEDTDAAQLLPSLYEYFGESMLTFVPLPEASLFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtaccgaaggaaacaattgaggtcatagcccagagcattggcatcagcaat
ttatctcccgatgtgttgcctgctctggctgccgatgtcgagtaccgtattcgagaaata
atgcaggaatctatcaaatgcatgaggcattcgaagagaactactttaactacggatgat
gttgatagtgcccttggtttaagaaatgtcgagccaatatatggatttgcttctggagac
ccactgcgattcaagcgagccgcagggcacaaggatttgttctatatagaagaaaaggat
gtggaattcaaggaagtgattgaagctcctctgcctaaggccccattggacaccaccgta
gttgctcattggttagctattgagggggttcaacctgcaattcctgaaaatccccctccc
gaagctcttcaaatgctttcacttcctgcggataacagaaagactgaagtcaaagaggat
ggagcatctgttgacattaaattacctataaagcatgtggtttcacaggaacttcagctt
tactttgaaaaaattaccgagttgactgtgaccagatctgagtcccctttatttaaagct
gcattagtgagcttggcaactgactcagggattcaccccttggttccttattttacactt
tttgttgctgatgaggtttctcggaatttgaataacttttctctactttttgctttgatg
cgtcttgtccggagccttcttcggaaccctcatatacatatcgaaccatatctgcaccaa
ctgatgccctcggtgctgacatgcctggttgctaaaagattaggaaataagttctctgac
aatcactgggaactgagaaatttcaccgctagtctagttgcttcaatatgcaagagattt
ggccaggtttattacaatctccagccacgtgtgaccaagacaatgttgactgctttcatc
gatccatcaaaaactctccctcaacattatggtgctgttcgggggatagcagccctcgga
gctaatgtggttcgattacttattcttcccaatcttgatccttatttgcgtcttctggag
ccagaaatgcaactagagaagcaaaagaatgagatcaagaggcatgaagcctggcttgta
tatggggctctattgcgcgcagctggtttgtgcgtctatgatcggctgaaaatgctacct
tctctgccatctccacctgcacgtaccgtctgtaggagcaatagcaaagtcgtgactact
tcttcaaataaacgtaaaaccaccatggataacatgatgcaccaaccaccgttgaagaaa
ctggcaacagacagctctatgggtgcaaactctctgccggcggacatagcaggagctagt
ggtggatattcaacaaatactggagctgcagactcatcaagggcttcagggaaaaacaat
gtggctggatcaagcagcagaagagagatagttggtggtcaaggattcaagacttcatct
gctcttgagcaggcgtggaaagaggatacagatgccgcacaattgctgccctcactgtat
gaatattttggtgaaagcatgttaacatttgttccgttacccgaagcgtccttattcttg
tga
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