Salvia splendens (scarlet sage): 121754013
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Entry
121754013 CDS
T07627
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121754013
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121754013
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
121754013
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
DUF6746
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121754013
NCBI-ProteinID:
XP_042005271
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Position
11:33248747..33251442
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AA seq
386 aa
AA seq
DB search
MELIAVQDSFERVAKRRKLSSSKSQEIIIQVVYEIEQALSRIQSSSDSIVADVDQKTVLA
ELKAKLHVVGSQTHLEGPLQELHTELTRYQKVLEKVLHPDISMACVDADFDSHMINQIII
RHFYSEALFDIVDCLVKEAGEDEAISLRLQYQEIHEILEALKSRDLGPASKWISVNQERL
RESGSDLELKLHKLQFVDLLQGKGRSAALKYARTYLAPLASRHMNAIQRLLCSVLWEERL
DRSPYADLADPSNWLSFAEDVTRAFCSFAGRSIRDPLTVALAAGMEGLPTLLKLANVMAA
NKQEWEAMNQLPVPLELGREFNFHPIFVCPVSRDQCSAENPPMLLPCGHVLCQQSIDKMS
KAGTRNFKCPNCPHGTSLSQCKQLCF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagctgattgctgtacaagattcattcgagagggttgcaaagagacgaaagctgtcg
tcttcgaaatcccaagaaataatcatccaagttgtctatgaaatcgaacaggcactgtca
agaatacagtcaagtagtgattccatcgttgcagacgttgatcagaagacagttcttgct
gaactgaaagccaagcttcacgttgtcggttcacaaactcatttagagggaccgctgcaa
gagcttcatacggagctcaccaggtatcagaaggtgcttgagaaagtgctgcatccggac
atatccatggcgtgcgtagatgctgatttcgacagccatatgattaaccagataattatt
cgtcacttctactctgaagccctatttgacatcgtcgactgcttggttaaagaagcaggg
gaagatgaagctatttcactcagattacaatatcaagagattcatgaaatactggaggct
ctgaagtcaagagatctcgggccagcttcaaagtggatctctgtgaaccaagagagactg
cgcgagtccggttcggatttggagctaaaactccacaaactgcagtttgtggaccttttg
caaggcaagggaagatctgccgcgcttaaatacgccagaacttatctcgctcctctggct
tctcgtcacatgaacgcgatacaaaggctcctttgcagcgtgctgtgggaagagaggctc
gacaggtccccctatgctgacctggcggatcctagcaactggctgagtttcgcggaggat
gtgacgcgggccttttgcagcttcgcagggcggtcgatcagggaccctctgaccgtcgcg
ctagctgctgggatggaagggctgccgactctgctgaagctggcgaacgtgatggcagcg
aataagcaggagtgggaggcgatgaatcagctcccggtgcctctagagctggggagggag
ttcaattttcatccaatctttgtctgtcccgttagccgggaccaatgcagcgcagagaat
ccgcctatgctgctgccgtgtggccacgtcctgtgccagcagtcgatcgataaaatgtcg
aaggccggtacccggaacttcaagtgccctaactgccctcatggtacttctttatcacag
tgcaagcaactatgcttttag
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