Salvia splendens (scarlet sage): 121754124
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Entry
121754124 CDS
T07627
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121754124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121754124
03036 Chromosome and associated proteins [BR:
sspl03036
]
121754124
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121754124
Coactivators
SAGA/TFTC/STAGA complex
121754124
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121754124
STAGA complex
121754124
TFTC complex
121754124
SAGA complex
121754124
SLIK complex
121754124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
121754124
NCBI-ProteinID:
XP_042005404
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All DBs
Position
11:5057152..5062116
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AA seq
540 aa
AA seq
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MSIVPKETIEVIAQSIGISNLSPDVLPALAADVEYRIREIMQESIKCMRHSKRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFKRAAGHKDLFYIEEKDVEFKEVIEAPLPKAPLDTTV
VAHWLAIEGVQPAIPENPPPEALQMLSLPADNRKTEVKEDGASVDIKLPIKHVVSQELQL
YFEKITELTVTRSESPLFKAALVSLATDSGIHPLVPYFTLFVADEVSRNLNNFSLLFALM
RLVRSLLRNPHIHIEPYLHQLMPSVLTCLVAKRLGNKFSDNHWELRNFTASLVASICKRF
GQVYYNLQPRVTKTMLTAFIDPSKTLPQHYGAVXGIAALGANVVRLLILPNLDPYLRLLE
PEMQLEKQKNEIKRHEAWLVYGALLRAAGLCVYDRLKMLPSLPSPPARTVCRSNSKVVTT
SSNKRKATMDNMMHQPPLKKLATDSSMGANSLPADIAGASGGYSTNTGAADSSRASGKNN
VAGSSSRREIVGGQGFKTSSALEQAWKEDTDAAQLLPSLYEYFGESMLTFVPLPEASLFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtaccgaaggaaacaattgaggtcatagctcagagcattggcatcagcaat
ttatctcccgatgtgttgcctgctctggctgccgatgtcgagtaccgtattcgagaaata
atgcaggaatctatcaaatgcatgaggcattcgaagagaactactttaactacggatgat
gttgatagtgcccttggtttaagaaatgtcgagccaatatatggatttgcttctggagac
ccactgcgattcaagcgagccgcagggcacaaggatttgttctatatagaagaaaaggat
gtggaattcaaggaagtgattgaagctcctctgcctaaggccccattggacaccaccgta
gttgctcattggttagctattgagggggttcaacctgcaattcctgaaaatccccctccc
gaagctcttcaaatgctttcacttcctgcggataacagaaagactgaagtcaaagaggat
ggagcatctgttgacattaaattacctataaagcatgtggtttcacaggaacttcagctt
tactttgaaaaaattaccgagttgactgtgaccagatctgagtcccctttatttaaagct
gcattagtgagcttggcaactgactcagggattcaccccttggttccttattttacactt
tttgttgctgatgaggtttctcggaatttgaataacttttctctactttttgctttgatg
cgtcttgtccggagccttcttcggaaccctcatatacatatcgaaccatatctgcaccaa
ctgatgccctcggtgctgacatgcctggttgctaaaagattaggaaataagttctctgac
aatcactgggaactgagaaatttcaccgctagtctagttgcttcaatatgcaagagattt
ggccaggtttattacaatctccagccacgtgtgaccaagacaatgttgactgctttcatc
gatccatcaaaaactctccctcaacattatggtgctgttncggggatagcagccctcgga
gctaatgtggttcgattacttattcttcccaatcttgatccttatttgcgtcttctggag
ccagaaatgcaactagagaagcaaaagaatgagatcaagaggcatgaagcctggcttgta
tatggggctctattgcgcgcagctggtttgtgcgtctatgatcggctgaaaatgctacct
tctctgccatctccacctgcacgtaccgtctgtaggagcaatagcaaagtcgtgactact
tcttcaaataaacgtaaagccaccatggataacatgatgcaccaaccaccgttgaagaaa
ctggcaacagacagttctatgggtgcaaactctctgccggcggacatagcaggagctagt
ggtggatattcaacaaatactggagctgcagactcatcaagggcttcagggaaaaacaat
gtggctggatcaagcagcagaagagagatagttggtggtcaaggattcaagacttcatct
gctcttgagcaggcgtggaaagaggatacagatgccgcacaattgctgccctcactgtat
gaatattttggtgaaagcatgttaacatttgttccgttacccgaagcgtccttattcttg
tga
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