Salvia splendens (scarlet sage): 121754627
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Entry
121754627 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121754627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121754627
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121754627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
121754627
NCBI-ProteinID:
XP_042005889
LinkDB
All DBs
Position
1:complement(44460452..44462781)
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AA seq
261 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNITFRTSADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIDKGRIEEPVYKSSGRSRSR
SPRPRGDDRDRDYRRSSQSGRGRSERESHRGRHRESRYRSRSRSRSRSRSVSPGYRRERG
RGKFDDGERRRRSRSYGSASPVRRSPSPRRTPSPNKSPLSREGSPAVRNAKIERSASPPK
SLSPRGRRDSRSPSPHDEADE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagatctgggccaccggatatcagagacacattctctctcctagtc
ctcaacatcacttttcgcacttcagctgatgacttgttccccctatttgataagtacggc
aaggtggtcgacgtgttcattcctcgagaccggagaactggggactccaggggttttgca
tttgtgcgatataagtatcaagatgaggctcaaaaggctgttgagaagctagatggaaga
gttgttgatgggagagaaataatggttcaatttgctaaatatggccctaatgctgaacga
attgataaaggtagaattgaggaacctgtttataagtctagtggcaggtcaagaagccgc
agtcctcgtccaaggggtgatgacagggatcgggattacaggaggagcagccaaagtggc
agaggaagaagtgagcgcgagtctcatcgtggcaggcacagggagtctcgctatcgaagc
aggagccgatcccggagtcgaagccgtagtgtaagtcctggttatcgcagagaacgtggt
agaggaaaatttgatgatggtgagagacgtagaagaagtcgttcttatggaagtgcatct
cctgttcgtcgaagtcccagtcctcggcgaaccccttccccaaacaaatcacctctatct
agggaaggaagtcctgctgttcgtaatgccaaaatcgaacgatctgccagcccccctaag
agtctctctcctcgtggccgtcgtgattctcgaagcccgtctccacatgatgaggctgat
gaataa
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