Salvia splendens (scarlet sage): 121754905
Help
Entry
121754905 CDS
T07627
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121754905
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121754905
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121754905
Protein phosphatases and associated proteins [BR:
sspl01009
]
HAD phosphatases
Fcp/Scp phosphatases
121754905
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121754905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
CEPT76_peptidase
Motif
Other DBs
NCBI-GeneID:
121754905
NCBI-ProteinID:
XP_042006128
LinkDB
All DBs
Position
11:complement(28608745..28613256)
Genome browser
AA seq
640 aa
AA seq
DB search
MSKYESLTVKDAVHKLQLFLLDGIKDENHLLATGSLISLGDYNDVVTERTIAEMCGYPLC
PNPLPSDRPHKGRYRISLKEHKVYDLQETYMYCSSTCLINSRAFAANLQEERSSDLNPAK
LSRIVKLFEESNLDTTVDMGKNGDLGISELKIQEKTGREAGKLSMEEWIGPSNAIDGYVP
RSDKNLESLQLNNNRKAAKKGKGPKHRLSDPNVQDIMSFDMNFTSTIITQDEYSVSKAAP
SVKAKESRGKLSANSVNCERKPMQNSAASLTDKNEVQPKRSDISLGSTGADDNVKAPEDI
SSACQSDDAWAATVPRSSIKTSDSKKSVRWADEKTDFDGQNLEEYEEFKEEKAALVTSHS
AVEEVGEEESYRFSSAEACAEALSRAAEAVASGKSDASDAVSEAGVIILPPPHEVGTSKS
EENADIIETDPVQLKWPLKPGVLSSDLFDSEDSWYDSPPDGFNLQLSTFSTMFMALFSWI
SSSSLAYIYGKEESFHEEYLSVNGREYPHKIVLSDGRSAEIKHTLAGCLARALPTLVTEL
RLPVPVSTLEQGLGRLLDTMSFTDPIPAFRMKQWHVIVLLFLDALSVSRIPSLTQYMLGR
RAIIPKVLEGAQIGSEEFEIMKDLVIPLGRAPQFSTQSGG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtatgaatcactgacagtgaaggacgcagttcataagcttcagctcttcctt
ctagatggaatcaaagacgaaaaccatctattagctactggttcattgatatccctcggt
gattacaacgatgtagtcaccgagcgcacgatagctgagatgtgcggctacccactctgc
cccaaccctttgccatccgaccgcccgcacaaggggcgttaccgcatctcactcaaggag
cacaaagtctacgaccttcaagagacgtacatgtattgctcgagtacttgtttgatcaat
agccgagcgtttgctgccaatttgcaggaagagagatcctcggatctcaaccctgcgaaa
ttgagcagaattgttaagctatttgaagagtcgaatttggacactaccgtggatatgggc
aagaacggagacctaggtatttccgagttgaagattcaggagaaaactggtagagaagct
gggaaattgtccatggaggagtggattggtccgtcaaacgcgattgatggctatgtgcca
cggagtgacaaaaacttggagtcacttcaattgaacaacaatagaaaagctgctaaaaag
ggaaaagggcctaagcatcggctctctgatccaaatgtgcaagacattatgtcctttgac
atgaacttcacaagtactatcattactcaagatgagtatagcgtttccaaagctgctcca
tcagtgaaggctaaagaatcaagaggaaagttgagtgctaacagtgtaaattgtgagagg
aagccaatgcaaaactcagctgcttcactgactgacaaaaatgaagttcagccgaaaagg
tctgatataagtttgggttctactggagcagatgacaatgttaaagcaccagaggatatt
tctagtgcttgccaaagtgatgatgcctgggcagctactgttccgaggtcctctataaag
acttcggattcaaagaaatcagtccgctgggcggacgagaagactgattttgatgggcaa
aatcttgaagagtatgaagaatttaaagaagaaaaagcagctttagtaacatcccattca
gcagttgaggaagtcggtgaggaggagtcgtatagattttcatctgctgaagcctgtgcg
gaggctctaagccgagctgctgaagctgttgcatcaggaaaatcagatgcatctgatgct
gtatctgaagcgggcgtaataatactaccacctcctcatgaagtgggtacttctaaatct
gaagaaaatgctgatattatcgagacagacccggtgcagttaaagtggcctcttaaacct
ggagttttgagttctgatttgttcgactctgaggattcttggtatgatagtcccccggat
gggttcaacttgcaattgtcgactttttcaacaatgtttatggcactcttttcctggata
tcatcgtcctctttagcatatatatatggaaaggaagagagtttccacgaggaatacttg
tcggtcaatgggagggagtatcctcacaagattgttctgtcagatgggcgctctgcggag
atcaagcatactcttgctggctgccttgctcgagccttacccactcttgtgactgaactc
aggcttcctgtaccagtttcaactcttgagcaaggactgggtcgcttactagatacaatg
tcttttaccgatccaattcctgcatttaggatgaaacaatggcatgttattgtcctgttg
tttcttgatgctctttctgtcagtagaattccatcgctgacccagtatatgttgggtaga
agagctataattcccaaggttcttgagggtgcacagattggttccgaagaatttgagata
atgaaggatctggtcatcccacttggccgagcacctcaattctcgactcagagtggaggc
tag
DBGET
integrated database retrieval system
