Salvia splendens (scarlet sage): 121755160
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Entry
121755160 CDS
T07627
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121755160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sspl04040
]
121755160
Ion channels [BR:
sspl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121755160
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
121755160
NCBI-ProteinID:
XP_042006376
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Position
11:30736032..30742206
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AA seq
772 aa
AA seq
DB search
MDASSRDEAPMLPATYLQSDNGGSSTRRGISGRTRSVSMSFATESPHPSEYQQNLVGFTG
PLRAVKQNSQVQMSGPLNPNRNNELVFRPPQTAAEAENRARNGDGDYVGKNEHLWRSGQL
GKCSDPYCTACPMFYDAKGQQKPSRTTAMIDAKYRNMFYGDAQSWAKRMRSRFLSYIPGV
INPHAKLVQWWNKFFVIFCIVASFLDPFFFFLLFMRKDYNCVALLKPKTREFLILRTITD
CVYIMHILLQFRLAYVAPETRVAGSGDLVDDPKKIAWNYFTTYFPVDLVVVLPMPQIILI
FFLPHSASSPGNEIIKYVLPSAILVQYIPRLSRFLPLVAGFSPTGFIFESAWANFLMNLL
TYILASHVVGSCWYLLSIQRVNKCLQDVCDRNKTSNCMKYLSCNHNYEKRFADIPDWNDW
KNNENASACFTKDGFDFGICEAAVNLTTHKDIFDRYLYSLFWGFQQISTLAGNQEPSYMP
LEVVFTMFIIGIGLLLFALLIGNMQNFLQALGRRRLEKSLRGRDVEQWMSHRRLPKHLRR
QVRAAERFNWAATRGVNEDSLIENLPEDLQREIRRHLFKFVKKVRIFQLLDEPVIDAIQE
KLKTRSYIKNTKILYPGGLVDKIVFIIRGKMKSTGEDGNDSILSEGDVCGEELLTWCLEH
SSVSKDGTSIRLPRHGLLSDRQVTCLTNVEAFVLRAADFEEVAGLFTRFLKIPLVQGAIR
YESPHWRGIAARRIQLAWRHKRKQTNRVDSSQVGSSRSPHNLSYRTRSKRKY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcatcgagagatgaagcacctatgctgccagctacatatttacagtctgat
aatggcggctcctctacaagaagagggatttctggtaggacgaggagtgtgtcaatgtct
ttcgctacggagtctccacatccatctgaataccagcaaaatctagttggcttcactggc
cctttgagggctgtgaagcaaaattctcaagtacagatgagtggtccgttaaatcctaac
cggaacaacgagctagtctttaggcctcctcagacagctgctgaggctgagaatcgggcc
aggaatggagatggggactacgtggggaagaatgagcacctctggaggtctgggcagctc
ggaaagtgcagtgacccctactgcacagcttgccccatgttctatgatgctaaggggcag
cagaagccgtcaaggacaacagcgatgattgatgctaagtatcgcaatatgttctatggc
gatgcacaaagttgggcaaagagaatgcgttcgcgttttctttcttatattcctggggtt
attaatcctcatgcaaaactcgttcagtggtggaacaagttcttcgttatcttttgcatt
gtcgcgtcatttctcgacccatttttctttttcctattgtttatgcgcaaggattacaac
tgcgtcgcattacttaagcctaagacacgagaatttctcatcttaaggaccattaccgac
tgcgtttatataatgcatatcctccttcagttcaggctagcttatgttgctcctgaaaca
agagttgcagggtctggcgatttagttgacgatcctaagaaaattgcctggaattatttc
acgacatactttcctgttgatctagttgttgtacttcccatgccacagattattttaata
tttttcttaccacactctgcctcgtcacctggaaacgaaattataaaatatgtccttcca
tcggcaattctcgttcagtatataccaaggctgagcagattcttacctttggttgctggt
ttttccccaactggcttcatttttgagtcagcctgggcgaatttcctcatgaatcttctc
acgtacattttggcgagccatgtggttggctcatgctggtatcttcttagcatacagaga
gtcaataagtgccttcaagatgtatgtgacaggaacaaaaccagtaactgtatgaaatac
ctcagctgtaatcataattatgagaagaggtttgcagacattccggactggaatgactgg
aaaaataatgaaaatgcaagtgcttgttttacgaaagacggttttgacttcgggatatgt
gaagctgctgtcaatctgaccacccacaaggacattttcgatagatacttgtattcactc
ttttgggggttccagcaaattagtacgctagctgggaatcaggagccgagctacatgcct
ctcgaagttgttttcaccatgttcataatagggattggtctgctgcttttcgctcttctg
attgggaatatgcagaactttctgcaggcacttggacgcaggaggttagaaaagtcttta
agaggccgcgatgttgaacaatggatgagccatcgtcgcttacctaaacatcttcgaagg
caagtccgagctgcagaacgcttcaactgggcagcaactaggggtgtaaacgaagactcg
ctgatagagaacttgccagaggaccttcaacgagaaattaggcgccatctctttaagttc
gtcaagaaagtacggatttttcaacttctcgatgaacctgtcattgatgctatacaagag
aagctgaagacaagatcctacatcaaaaacactaagatactatatccgggtggtctagtt
gataaaatagtatttataattcgtggaaagatgaaaagcacgggagaagatggcaacgat
tctatcctgtctgaaggcgatgtttgcggagaagaactacttacctggtgcctcgaacat
tcttccgtcagtaaagatggaacgagtattagacttccacgacacgggctgttgagcgac
aggcaggtaacttgcttaacaaacgtcgaagcctttgtattacgagctgctgattttgaa
gaagtggcgggtctcttcacaagatttttgaagattccactcgttcagggcgccataagg
tatgaatcaccgcattggcgtggaattgcagctagacgaatccaactagcatggagacac
aaaaggaagcaaacaaatcgagttgattcaagtcaagtaggttcctcaaggtcaccgcac
aacttgtcatatcggactagaagcaagcgtaaatattag
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