Salvia splendens (scarlet sage): 121755245
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Entry
121755245 CDS
T07627
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121755245
09122 Translation
03013 Nucleocytoplasmic transport
121755245
03015 mRNA surveillance pathway
121755245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121755245
03041 Spliceosome [BR:
sspl03041
]
121755245
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121755245
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
Cap binding complex
121755245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
121755245
NCBI-ProteinID:
XP_042006458
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All DBs
Position
11:complement(3316558..3327319)
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AA seq
861 aa
AA seq
DB search
MSSWRSLVLRLGEKCAEYGGNTDYRDQLETCFGVVRRELPHSQDDILSFLLQCAEQLPHK
IPLYGTLVGLLNLEDEDSVKIILEDTHGNLQAALDSGSCNRIRILMRFLTALMCSKVLQP
SSLVVLFETLLSSAATTVDEDKGNPSCQACADFYIICILSCLPWGGAELVEQVPEEIDRV
MVGIQAYMSIRRHVSDAGCSAFEHIDDRSQDDGGKDFLEDLWSRIQDLSSKAWKLDSVPR
PHLPFEPQLVAGKSHDFGSLNCPELPEPPASDTSITYGKQKHEAELKYPQRIRRLNIFPA
SKFEDLQPIDRFVVEEYLLDVLYFLNGCRKECASSMVGLPVPFRYEYLMAETIFSQILLL
PQPPFRPIYYTLVIMDLCKALPGAFPAVVAGAVRSLFDKIAELDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVCVQEVLEREVRLSYWDKIKQSIESAPALEDLLPPK
GTTNFIYSADDGDQTERGLSSELSGMVKERVTTREIISWIDNHVLATHGLDVTLRVVVQT
LLNIGSKSFTHLITVLERYGQIISKICPDQDRQVMLISEVSSFWKNNAQMTAVAIDRMMG
YRLVSNVAIVRWVFLPSNVDQFHVSDRLWEILRNALTKTFNRISDLRKEVSSLKKSVVLA
AEAASKAQAELEDAKSKLILTLVDGEPVLAENPVKMKRLNANVERTKQEELSTQESLEAK
ESLLARAVDEIEGLFLCLYKSFSEVLAEPLQDTDGSLHPSSVEADEMAIENEDTTAMELD
KEGGKSEKSDSNGGRTVNGYNVGEKEQWCLSTLGYVKAFTRQFASEIWPLAEKLDAEVFT
QDVHPLLRKAVYYGLRRLDEF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttggagaagcctggtgcttcgactcggagagaaatgcgccgaatacggcggg
aatacggattacagagaccaactcgaaacttgctttggtgtggttcgccgtgagctgccg
cattcgcaagatgatattttatctttccttctccagtgtgcagaacagttgcctcacaag
atacctctctatgggacactggttggtctgctaaatttggaagatgaagattccgtcaag
ataattttggaggatacacatggaaatttacaggccgctttagatagcggaagttgtaac
aggatccgaatactcatgcgctttttgactgccttgatgtgcagcaaagttctccaaccg
agttccttagttgttttgtttgaaacactgctgtcttcagctgctactactgtagatgaa
gataagggaaatccttcttgccaagcttgtgcagacttctatataatttgtatcttgtct
tgtctcccttggggtggagcagaacttgttgagcaagtccctgaggagatcgacagggtc
atggtagggatacaagcctacatgagtataagaaggcatgtttctgatgctggctgctct
gcattcgagcatattgatgatagaagtcaggatgatggtggaaaagatttcctggaggat
ctttggagccggattcaggatctctctagcaaggcctggaagctggatagtgttcctaga
ccacatctaccatttgaaccacaactagtagctgggaagtctcatgactttggttccttg
aactgccctgagcttcctgaacctccggcttcagatacgagcatcacatatggaaaacaa
aagcatgaagctgaattgaagtatcctcagcgcattaggagacttaatatctttcctgct
agtaaatttgaggacttgcaaccgatagatcggtttgtcgtagaagagtatttactggac
gttctgtatttcttaaatggatgtcgaaaggagtgtgcttcatccatggttggcctgccc
gttcccttccggtacgagtaccttatggctgagacaatattctctcagattctcttactg
ccccaacctccttttaggccaatttattatacattggtcattatggacctatgcaaggct
cttcctggtgcctttccagctgttgtggccggggctgttcgttcactttttgataaaatt
gctgaactagacatggagtgccggactcgtctgattctttggttctcacaccacctatca
aattttcaattcatatggccatgggaagaatgggcttatgtcttggaccttccaaaatgg
gccccacagcgagtgtgtgtccaggaggttttggaaagggaagtgcgtctatcatattgg
gacaaaatcaagcagagcatagagagtgcccctgctctggaggacctgcttcccccgaaa
ggtacgacaaatttcatatacagtgctgacgatggagatcaaaccgagcgcggcctctct
tcagaactcagcggcatggttaaagaacgagtgactacccgcgaaattatttcatggatt
gataatcatgtgcttgcaactcacgggctggatgtcactctcagggtggttgttcagacc
cttcttaatattggttcaaaaagttttacccatttgattactgtattggagaggtatggc
caaattatttcaaagatttgtccggatcaagataggcaagttatgttgatatctgaagtg
agttcattctggaagaacaatgctcaaatgactgctgtggcgatcgacagaatgatgggt
tatcgtcttgtatctaatgtggctattgtgagatgggttttcttgccatcaaatgttgat
cagtttcacgtttctgatcgtctgtgggagatactaagaaatgctcttacgaagacattc
aatcgtatttctgatttaagaaaagaggtatcatccctcaagaagagtgttgtattggct
gctgaagctgcatctaaagctcaagctgaattagaggatgctaagtcaaagcttattctt
actcttgtggatggtgaaccagttcttgctgaaaatcctgtgaaaatgaagcgattgaat
gcaaatgttgaaagaacaaaacaggaggagctttctactcaggaatcattagaagcaaaa
gaatcccttcttgcacgagctgtggatgaaattgagggattgtttctatgtttgtataaa
agcttctctgaggtattggctgaaccacttcaagatacggatggttccttgcacccatct
tctgttgaggcagatgaaatggctattgaaaatgaagacactacggcaatggaattagat
aaagagggtggtaaatctgaaaaaagtgattccaacggaggaaggactgttaatggttat
aatgttggtgaaaaggaacagtggtgtttatcaaccttgggttatgtgaaggcttttaca
cgtcaatttgcttcagaaatttggccacttgctgagaaattagacgctgaggttttcaca
caagatgttcatcctcttctaaggaaagctgtatattatggtttgcgtcggctggatgag
ttttag
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