Salvia splendens (scarlet sage): 121755495
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Entry
121755495 CDS
T07627
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121755495
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121755495
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
121755495
NCBI-ProteinID:
XP_042006725
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Position
11:complement(33435494..33440518)
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AA seq
642 aa
AA seq
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MHGPNSNSNPNAAAARPNSKPPQPPLLIPPGHVAFRLLCHASRIGGLIGKSGHIIKQLQL
LTSSRIRVEDPPPSSDNRVISVVASPAVVKRIKLCAEEESNGGAEIEGGGGEEVWFDVSA
GQEGVVRVFERVVQVAAEGEAVISGVVSCRLLVSKFHGGAVIGKGGKVVEKIRKDTGCKI
KVLAVEKNYSNLPSMDEIVEIEGLGLAVKKALVAVTSRIQECPPSEETRSYPTRPLESEP
LPIQTVDLPQQQSPILQPTPSNYINHSWGGGTSLVPEKVSYISPTIPQLEVVFKILCPNE
HVGSIIGKGGCIVKAIQHETGASISIGSPVENCDERLITITAMESVEYKYSPAQKATIVV
FTRSTETGLLKGFRSDPKESPVSARVLLASNQVGCLLGKGGAIISEMRKMTSTSLRIIGG
DQVPNCASENEEVLQITGEFANVQDALYKVTGRLRDNMFSNRMLSGNRNRNYSRTDNDAY
GIVRNRPTYGSHQSLADSDKTNEHKSLTQSMDHLAISNNNDRLLTPSSFTSMALSGVNQG
NIMANGRSLATVKSGEQIGSGTRPAIAENTMTVEVVVPEAAVGSISGENNIDFARLRQIS
RATVILQEACPGTTDRTVVISGTPDETQAAQSLLQAFILSGS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcacggccccaattccaattccaaccccaacgccgccgccgcccgccctaattccaag
ccccctcagccgccgctcctaatcccccccggccacgtcgccttccgccttctctgccac
gcctcccgcatcggcggcctcatcggcaaatccggccacatcatcaagcaactccagctc
ctcaccagctcccgcatccgtgtcgaggaccctcccccctcctccgacaaccgcgtcatc
agcgtcgtcgcctcccccgccgtcgtcaagcgaatcaagctctgcgccgaggaggagagc
aatggcggcgccgaaattgaaggcggcggaggggaggaggtgtggtttgacgtctcggcg
gggcaggagggggtggtgagggtgtttgagagggtggtgcaggtggcggcggagggggaa
gcggtgatttccggggtcgtttcgtgtaggctgttggtgagtaagtttcatgggggagcg
gtgattgggaaaggggggaaggtggtggagaagattaggaaggatactggttgtaagatt
aaggtgttggcggtggagaagaattattcgaatttaccatccatggatgaaatcgttgag
attgaaggtcttggtttggctgtcaaaaaagcacttgttgctgtcactagtcgcattcaa
gagtgtccaccttccgaggaaacaagatcatatcctaccaggcctcttgaatcagaaccc
ttgccaattcaaactgttgatctgccccagcagcagagcccaatattgcaacctacacct
tcgaactatataaatcattcctggggaggaggtacatcattagtacctgagaaggtctcc
tatataagccctacaataccacaactagaagtggtttttaagatactctgccccaatgaa
cacgttggcagcattattggaaagggaggatgtatcgttaaggctattcaacatgaaact
ggtgcttctataagtattgggtcgcctgtagaaaactgtgatgaacgattgataaccatt
acggcaatggagagtgtagaatataaatactcacctgcacagaaagcaactattgttgtg
tttactagatccacagagactggtcttttgaagggattccgttcagatccaaaagaatca
cctgtatcagctcgagttctgttggcatcaaaccaagttggttgcctactgggaaaagga
ggcgcgatcatttcagagatgagaaagatgactagcactagcctaaggatcattgggggt
gaccaagttccaaattgtgcctctgaaaatgaagaagttttacagattacaggagagttt
gctaatgtacaagatgctctgtataaggtgactggtagattgcgagataatatgttctcc
aacagaatgttgagtggaaacaggaatcgtaattattcaaggactgacaatgatgcatat
ggcatcgtaagaaaccgtcctacttatggatcacatcaatctttagctgactcagacaaa
accaacgaacacaaatccttaactcagagcatggatcatcttgcaatttccaataataac
gatcgattgttgacacctagttcattcacatcaatggctctctctggagtaaaccaggga
aatattatggctaatggcagaagtttagctacagttaaaagtggtgaacaaatcggcagt
ggaactagacccgcaatcgcagaaaatactatgacagtagaagtcgttgttcctgaggct
gcggttggctccatatccggggagaacaatattgatttcgctaggttgcgacagatatct
cgagccacggtcatactgcaagaagcttgtcctggaacgacagatagaacagttgttata
tccgggacaccagatgaaacgcaggctgcccaaagcctgctccaagcattcatactatct
ggatcatag
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