KEGG   Salvia splendens (scarlet sage): 121755553
Entry
121755553         CDS       T07627                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121755553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121755553
   03041 Spliceosome [BR:sspl03041]
    121755553
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121755553
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121755553
Spliceosome [BR:sspl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121755553
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 121755553
NCBI-ProteinID: XP_042006800
LinkDB
Position
11:3101115..3103239
AA seq 411 aa
MDLTKKRKADENGRAYPLTADLGNPMAAVPPSSMGILAPEDAEKILEPFTKEQLLPIIRA
AVLRHPDVLEAVRAVADADPVQRKLFVRGLGWETTTEKLRQVFSTYGELDEANSIVITDK
NTGKSKGYGFVTFKHIDAAILALKEANKKIDGRMTVTQLAAAGNSGHSHSSDVALRKIYV
GNIPFEISSERLLAHFSMYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGAKASLVDPMKT
IDGHQVVCKLATDNKKPKPNAGPPGGMAPGMPNSGPMGMPPRNYGMGGYMGYGPGPNMPQ
PPQQGGMMHQNVGYNAAMGGPGGPGGQGYGGGYGGGASGYDGVGGAGAGEYGGGMGNAGG
YRMPPSSLGMQGSGGYPDSGSYGLQSAYPPQPNHPAGPGPRLPAYQGMPPY
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggatctcaccaagaaacgcaaggccgatgagaacggaagagcgtatcccttaaccgcc
gacctcgggaaccctatggctgccgtgccgccgtcttcgatgggcatccttgctcccgaa
gacgcagagaagatcctcgagcccttcaccaaggagcagctccttccgattattcgcgcc
gccgtgctccgccaccccgacgtcttggaggccgtgcgcgccgtcgccgacgccgatccc
gtccagcgcaaactcttcgtccgcggcctcggttgggagaccacgacggagaaattgcgt
caagtgttttccacttatggggaactggatgaggcgaattccatcgtaatcaccgataag
aataccgggaaatcgaagggctacgggtttgtgacgtttaagcacatcgatgctgcgata
ttagccttgaaggaggcgaataagaagattgacgggcggatgacggtgactcagcttgcc
gctgctggaaattcaggtcattctcattcgagtgatgtggctttgaggaagatttatgtt
ggtaatatcccgtttgagatttcctccgagagattgttggctcacttttcgatgtacggt
gagattgaggaagggccgttgggatttgataagcagactggaaaagccaagggttttgcc
tttttcgtgtataagacagaggagggtgcgaaggcatcattggtagaccccatgaaaaca
attgatggtcatcaggttgtgtgtaagttggctacagataacaagaaaccgaagccaaat
gctggaccacctggcggaatggctcctggtatgccgaattcggggcctatgggtatgccg
ccacggaattatggtatggggggctatatgggatacggcccagggcctaacatgcctcag
cctccgcagcagggtggaatgatgcatcagaatgtaggctataacgctgcaatgggtggg
cctggaggacccggaggtcaaggttatggtggtggatatggaggtggtgcatcggggtac
gatggagtaggtggggctggagccggggagtatggtggaggcatgggtaatgctggggga
tacagaatgcctcctagtagcttggggatgcagggctctgggggttatcctgatagtggg
agctatgggcttcagtcggcatatcccccgcagccaaaccaccctgctggtccagggcct
agacttccggcctaccagggcatgccaccatattga

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