Salvia splendens (scarlet sage): 121755584
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Entry
121755584 CDS
T07627
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121755584
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121755584
REST complex
121755584
Heterochromatin formation proteins
Other heterochromatin formation proteins
121755584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
MC7
Motif
Other DBs
NCBI-GeneID:
121755584
NCBI-ProteinID:
XP_042006838
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All DBs
Position
11:11050800..11058283
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AA seq
1310 aa
AA seq
DB search
MKRSRDDVFATAIPSPTEPSGKAQVSTARSAQKLQTTDALSYLKVVKEKFQDKGDLYNEF
LDVMKEFKAQRIDTSGVIVKVKELFRGERDLILGFNAFLPKGYEITLPAEDDEPLLKKKP
VDFEEAIGFVNKIKTRFQGDHHVYNAFLDILNIYRKNNMSITEVYQEVSGLFQDHADLLV
EFTHFLPYTTAAAPVHRAQPNKNHISLQNSGGSPMTMIRSIEQKPAAGNSFVICPDSEQW
KVSKEDSKTELHYDDNLDSVRKFAGGDDSANDQLHKDNPVSIFCGKVKERLNDSESYKKF
LDCVRSYSSKFVTLPQFQKLVASILGSHPDLREQCEDFIIYVEKTGSKQHFRSLKVDDRE
ADVNNKEDSDKNIDHDNTERDRSDKALAFSKDVQGQKLSITREKFMAKPIHELDLSNCES
CTPSYRLLPDNYPIPSVSCRTKIGSEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCE
DDRFELDMLLESVNATTKRVEELLDSMNYHTDKIGSSSHIGDHLTAVNLRCIERLYGDHG
LDVRDVLRKNAPLALPVILTRLKQKQEEWERCRSDFNKIWAEIYAKNYHKSLDHRSFYFK
QQDTKNLSAKAFLAEIREMSEKDQNEDEKILSISGGYKQPIKPHMKFEYPDPDIQEDLYQ
LMKYACGEVCTPEQHDKVMKIWTTFIEPVFSIPSRLSVEDMKETVNNDSAKTLANLGEGN
GIPVGEAASNMSKTGGDNIPTEEPRCSGILMGHGDNGVKNCGSPNADNAACEIDISRNAT
QNGVMRTDSSIMPAISGTSKQAGFFEQVTPNSTGEKNINLENGSSSAIGDHGTTVVLNNK
PQGGLYMKVTSSSVEGIQAQRCQNEIIGFDKDEREEGELSPSKNPEGGILGAFGEVAYGS
CNSRQTGGEELCVVEVGRENDVNADDEGEESAKGSSDSENGYKIAEVSATDSADREERSP
GDHDEDEDHDENDNKDASEPEAEGVADIHENEGMVAFSGHVLHTVKPLTTTLPAALPVKE
RNSEIFYGNDSFYLLFRLHQILYERMHSAKLHSSSPENKWRILNDSNTADSYARFKDALH
SLLDGSSDNAKFEDDCRTIIGAQSYILFSLDKLIHKLVKQLQTIASEEMENKLIQLYSYE
RSRSPRKFTDAIYHENARFLLPEDNLYRIECVPSPTCLTVQLMKNEQDKPEETAIYMDPA
FAAYLNDELLAVSPERKGKHKIFLKRNKRKFQTQDKISDTSKATEQLVTHNGLEIKVASN
TLKASYVINSEDFLYRLSKRRKTQFHSRSSSSASNGCSQRVRRSGRLMVG
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgatgtttttgcgactgccattccttctccaactgagccttct
ggaaaagcccaggtgtcaacggcaaggagtgcgcagaagctccagacgactgatgccttg
tcatatctcaaagttgtgaaggaaaagtttcaggacaaaggggacttgtataatgagttt
cttgatgtcatgaaagagttcaaggctcaaaggattgatacatctggtgttatagtaaaa
gtgaaggaactatttagaggggaacgggacctaattctgggtttcaatgcctttttacca
aagggatatgaaattaccctcccagccgaggatgatgaaccacttctaaaaaagaagccc
gtagattttgaagaagcaattggttttgtaaacaaaataaagaccagatttcagggtgat
catcatgtatacaatgcatttcttgacatcttgaatatatacagaaaaaataatatgtca
ataacagaagtctatcaggaggtttcaggtctttttcaggatcatgctgacctccttgta
gagtttactcattttttaccttatactactgctgccgcccccgtccaccgtgctcaaccc
aataaaaatcatatctcgctgcagaacagtggaggctctcccatgacaatgattcggtcc
attgagcagaagcctgctgcaggcaattcatttgttatttgccctgattcagagcaatgg
aaagttagtaaagaagatagcaaaactgagcttcattatgacgataacttggacagtgta
agaaaatttgccggcggagatgattctgctaacgaccagttacataaagataacccagta
tcaattttctgcggaaaagtgaaggaaagattgaatgattccgaaagctacaagaagttt
ttggactgtgttcgttcctatagcagcaagtttgtcacactgcctcaatttcaaaagctg
gtagctagtatactgggttcacatccagacctcagggaacagtgcgaagatttcataatt
tatgttgagaagacaggcagcaaacaacatttcagatctctaaaggtagatgaccgtgaa
gcagatgtgaataataaggaagacagtgataaaaatatagatcatgacaatactgaaagg
gatagatccgacaaggctcttgcttttagcaaagatgtccaaggacagaaactgtccatt
acaagggagaagtttatggcgaaacccatccatgaacttgatctctctaactgcgaaagc
tgcactccaagttaccgacttcttcctgacaattatccgattccatcagtgagctgtaga
accaagattggttctgaagtgctgaatgatcattgggtgtctgtcacttcaggaagtgag
gactattcattcaaacatatgcgcaaaaaccaatatgaagaaagcctgttccgttgtgag
gacgataggtttgaacttgacatgctgttggaatctgtgaatgcaacaacaaagcgtgtt
gaagaattgttagatagtatgaactatcatactgacaagattgggagttcatctcatata
ggtgatcatctgacagctgttaaccttcggtgtattgagcgtttatatggtgatcatggg
cttgacgtaagggatgtgcttaggaagaacgcgccccttgcactgccagttattttaacc
aggctgaagcagaagcaggaagaatgggaaaggtgccgctccgatttcaataagatttgg
gctgaaatttatgctaaaaactaccacaagtcactcgatcatcggagcttctattttaag
caacaagatacaaagaacttgagtgctaaagcatttttagctgaaatcagagaaatgagt
gaaaaggatcagaatgaagatgagaagattctttcgatcagtggtggatataaacaaccc
atcaaacctcatatgaaatttgaatatcctgatcccgacattcaagaagatctatatcag
ctcatgaaatatgcttgtggagaagtgtgtacacctgaacagcatgacaaagtcatgaag
atttggacaacattcattgaaccagtgttcagcattccttcccgtcttagtgtggaggac
atgaaagaaactgtaaacaatgattcggctaaaacattggccaatttgggtgaagggaat
ggcatccctgttggtgaggctgcttcaaatatgtccaaaactggaggtgataatattcca
actgaagaaccccgctgcagcgggatactaatgggacatggtgataatggggtcaagaat
tgtggttctcctaatgcagataatgctgcgtgtgagattgatatatcacgcaatgcaacc
caaaatggagtaatgcgcacagattccagcatcatgcctgcaatttcagggaccagcaaa
caagctggtttctttgagcaagttactccaaactctacaggagaaaagaacataaatctg
gaaaatggatcaagcagtgctattggtgatcatgggactactgtagtgctgaacaacaaa
ccacagggtggtctttatatgaaagttacttcctcttcagttgaggggatccaagctcag
agatgtcagaatgaaattataggtttcgataaagatgaacgagaagaaggtgagttatcc
cctagtaagaatcctgaaggcggcattttgggtgcatttggagaagttgcgtacggttct
tgtaatagtagacagactggaggagaagaactttgtgttgtggaggtgggcagagaaaat
gatgttaacgctgacgatgaaggtgaggaaagtgccaagggctcctcagacagcgagaat
ggctataaaattgctgaagtttcagcaactgattcagccgacagagaagagcgctctccc
ggagatcatgatgaagacgaggaccatgatgagaatgacaacaaggatgcgagtgaacct
gaggcggaaggcgtggcagacatccatgagaatgagggaatggtggcattttcgggtcat
gttctacacactgtgaagcctcttacgacgacattgcctgctgccttacctgtgaaagag
aggaactcagagattttctacggaaacgattccttctatttgcttttcaggcttcatcaa
attttatatgaaagaatgcatagtgctaagttacattcgtcatcaccagaaaataaatgg
aggatcttgaacgattctaatacagcggattcatatgccagatttaaggatgcactacac
agtttgctggatggatcatctgataatgcaaagttcgaagatgattgtcgaactattatt
ggtgctcaatcctacatcctcttttcactagacaaactgatacataaactcgtcaaacag
ctgcaaacaattgcaagtgaggagatggagaacaaactcattcagctatattcatacgaa
agatcaagaagtcctcgaaaatttactgatgctatttatcatgaaaatgcacgttttctt
ctccccgaagacaacttgtatcgtatagaatgtgtgccttccccaacatgtttaacggtt
cagctcatgaaaaacgagcaggacaaacctgaagagacagctatctacatggaccctgcg
tttgcagcttatttgaatgatgaactactagcagtttctccggaacggaaaggaaaacat
aagatattcttgaagagaaacaaaagaaaatttcagactcaagacaagatctccgacacc
tccaaagccacggaacaacttgtaactcataatggtcttgaaatcaaggttgcttccaat
acactgaaggcttcttatgttataaattcggaagacttcttgtatcgcctgagcaaaagg
aggaaaactcagtttcacagccgttcgagcagtagcgcttccaatggttgttctcaaaga
gttagaagaagcggcagattgatggttggttga
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