Salvia splendens (scarlet sage): 121755736
Help
Entry
121755736 CDS
T07627
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121755736
09124 Replication and repair
03420 Nucleotide excision repair
121755736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121755736
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121755736
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
121755736
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121755736
TCR (transcription coupled repair) factors
Cul4-CSA complex
121755736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
121755736
NCBI-ProteinID:
XP_042007038
LinkDB
All DBs
Position
11:complement(1911710..1919421)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG
RIATLELFRPHGETQDLLFIATERYKFCVLQWDAETGEVITRAMGDVSDRIGRPTDNGQI
GIVDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHMKTYEVNLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYS
SASSFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVSGLKIELLGET
SIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGLVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVS
FINETRILAMNIEDELEETEIEGFCSNVQTLFCHDAAYDQLVQVTSSTVRLVSATSRELR
NEWFAPEGYSINVATANVTQVLLATGGGHLIYLEIGDGVLREVKHTQLEYDISCLDINPI
GDNKNCSQLAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFVLTTSNGALSDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNTAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNLSAADDSEMHFVRLLDDQTFDFISTYPLDQFECGCSVLSCSFSDD
NNVYYCVGTAYVMPEENEPTKGRVLIFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMPRDDGSHELQSECGHHGHILALYVQTRGDFVVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYVFLEKLQMNMRKV
IKGVGGLSHEQWRSFYNEKKTVEAKSFLDGDLIESFLDLNRNRMEEISKAMNVAVDELMK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatggaattatgtggtgacggcgcacaagcccaccaacgtcacgcattcgtgc
gtcggcaatttcactagcccgcaggagctcaatctcatcattgcgaaatgcacccggatt
gagattcatttgctctcacctcaaggcttgcagcctatgttggatgtgccgatatatggg
agaatcgccacactcgagctttttcgcccacatggagaaacacaagatctccttttcata
gctacagaaagatacaaattctgcgttttgcaatgggacgccgagactggcgaggttatc
acaagagccatgggtgatgtttctgatcggattggtcgtcccacagataatggacagatt
ggaatagttgatccagactgcaggttgattggtctacatctgtatgatgggttgttcaag
gtcatcccatttgataacaaaggccaactcaaagaggcatttaatatcaggcttgaggag
cttcaggttttagatatcaagtttttgtatggttgccctaagccgaccattgttgtactt
taccaggataacaaggatgcgcgtcatatgaaaacatacgaggttaatttgaaggataaa
gattttgttgaaggtccgtggtcgcaaaacaatcttgacaatggggcagatttgttaatc
ccagtgccacctcctctttgtggtgtcctcattattggtgaagaaacaatcgtgtattcc
agtgcctcaagtttcaaagcaatcccaattagaccttctattacaagagcctatggaagg
gttgatgcagatggttcacgctacttattaggagatcacaatgggcttttgcatctactt
gttataactcatgagaaggagaaagtatctggactcaaaattgagctcttgggggaaact
tctattgcatcatccatatcatatcttgataatgctgttgtttttgttggctcaagttat
ggagattcacagcttataaagcttaatcttcaaccggacgcaaaaggttcttatgtggaa
gttcttgaaagatatgtgaatttggggccaattgttgatttctgtgtggttgacttggag
aggcaaggtcaaggtctagttgtaacttgctcaggtgcctacaaggatggttccttgcgc
attgtgcgaaatggtattggaataaatgaacaggcatctgtagagcttcaaggcatcaag
ggcatgtggtcgctgcgatcagctactgatgatccatatgatactttcttagtcgtcagc
tttatcaacgagacacgtattttggcaatgaatattgaagatgaattggaggaaactgag
attgaaggtttttgttccaatgtacagactttgttttgccatgatgctgcatatgatcaa
cttgtgcaggttacttcaagcacagtgagactagtcagtgctaccagcagagagcttcgc
aatgaatggtttgctccggaaggttattcaattaatgttgccaccgccaatgtcactcaa
gttctattggctactggcggaggacatttaatttatctagaaattggtgacggtgttctg
agagaagtgaaacatacccagttggagtatgacatctcatgcctggacattaatccaatt
ggtgataacaaaaactgcagtcaactagctgcggtgggaatgtggacagatattagtgtt
aggatattttcacttcctgacttgaaccttataacaaaggagcatttgggaggggagatc
attcctcgttctgtacttctttgttcttttgaagggatatcttatctgttatgtgctctt
ggggatggacatctcttgaattttgtgttgactaccagcaacggtgcgctatcagacagg
aagaaagtttctttagggacccaaccaattactctacgtactttctcatcaaagaatgcc
acgcatgtatttgctgcttctgatagaccgactgtcatctatagcagtaacaagaaattg
ctttacagcaatgtaaatctgaaagaagtcagttatatgtgccccttcaatacagctgct
ttccccgacagccttgctattgctaaagaaggcgaactaacaattggaaccatagatgat
attcaaaagcttcacatacgctcgatcccgcttggggagcatgcacggcgtatatgtcat
caggaacaaacacggacttttgccatttgtagtttaaaatataacctgtcagcagcagat
gactctgaaatgcactttgtccgcctgttagatgaccagacattcgatttcatatctact
tatcctctggatcaattcgagtgtggttgttccgtccttagctgctcgttctctgatgac
aataatgtgtactactgtgtggggactgcatatgtaatgccagaagaaaatgaacctact
aagggtcgggttttaatttttattgtagaagatggaaaactccaactaattgctgagaag
gaaaccaaaggtgctgtttattctcttaatgccttcaatgggaaactgcttgctgccatt
aatcaaaagattcagttgtacaagtggatgccacgagatgatggctctcacgagttgcaa
tccgaatgtggacatcatggccacatacttgccctttatgttcagactagaggggatttc
gtcgtagttggtgatctgatgaaatcaatatctttgctgatttacaagcatgaggagggt
gctattgaggagcgagctcgggactacaacgcgaattggatgtcagctgtcgaaattctg
gacgacgatatttaccttggagctgagaataacttcaacctcttcaccgtccgtaaaaac
agtgaaggagcaactgacgaggagcgtgggcgcctcgaggtcgttggcgaataccacctt
ggcgaattcgtcaatcgattccgacatggttcactagtcatgcggcttccagattctgac
gttggccagatcccaacggtcatattcggcacagtcaatggagtcatcggggtcattgcc
tctctcccccacgagcagtacgtcttcttggagaagctgcagatgaatatgcggaaagtg
atcaagggcgtgggggggctcagccacgagcagtggagatccttctacaatgagaagaaa
accgtcgaggcgaaaagcttcctagatggagatctgatcgaatcgttccttgatctcaac
aggaataggatggaggagatttcgaaggccatgaatgttgctgtggatgaacttatgaag
agagtggaagagctgactaggttgcattaa
DBGET
integrated database retrieval system
