Salvia splendens (scarlet sage): 121755778
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Entry
121755778 CDS
T07627
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121755778
03036 Chromosome and associated proteins [BR:
sspl03036
]
121755778
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121755778
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Topoisomerases
121755778
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121755778
Centrosome formation proteins
Centriole proteins
121755778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
121755778
NCBI-ProteinID:
XP_042007097
LinkDB
All DBs
Position
11:27386223..27411692
Genome browser
AA seq
1485 aa
AA seq
DB search
MAGAKKAPLTSSNNANIPPPETAPTAGTKKTIEQMYQKKSQLEHILLRPDTYIGSVEKHT
QNLWVYDNDQMVQRSVTYVPGLYKIFDEILVNAADNKQRDPKMDSVKVTIDVESNTISVY
NTGDGIPVEIHQEEGVYVPELIFGHLLTSSNYDDDEKKTTGGRNGYGAKLTNIFSTEFVV
ETADGKRQKKYKQVFSNNMGVKSEPTLSKCRASENWTKITFKPDLAKFSMTCLEDDVVAL
MKKRVIDVAGCLGKTVKVELNGQMFQFKTFSNYCELYLKSVAASDSDPLPRFEEHVHDRW
QICISRSDGQFQQVSFVNGIATTKGGTHVDYVTNKIASHLVTVINNKNKKSKSFELKPHN
VKNHLWVFVNALIDNPAFDSQTKETLTLRAGSFGSSWDFTSKFLDKVAKSDIMKNIEEWA
EFKQQKDLKKTDGSKNKRVLVEKHSEAHEWGKKEADQCTLILTEGDSAKALAIAGLTIIG
KRHYGVFPLRGKLLNVREASHTQIMQNAEFTKLKQILGLQHGVKYDDNKSLKSLKYGHVM
IMTDQDHDGSHIKGLLINLFHSFWPALLKVPSFLLEFITPIVKAKHRDGRRIEVFYTMPQ
YEAWKERLGPEAKNWTIKYYKGLGTSTGEEAKEYFRDLEKHKKDFVWENDEDGEAIELAF
SKKKIEARKSWLRQFEPGTFLDDVDKHIKYRDFVHKELILFSIADVQRSIPSMVDGLKPG
QRKILFCSFKRNFIKEAKVAQFCGYVSEHSAYHHGEQSLAGTIIGMAQDFVGSNNINLLL
PNGQFGTRGQGGKDHASSRYIYTQLAPVTRFLFPKADDILLNYLNEDGQSIEPTWYIPII
PMVLVNGSEGIGTGWSSFVPNYNPFDIIRNIRHLLNDEPMEAMHPWYKGFIGSIEKNVTK
DTGSYTVCGNIEEVDENTLRITELPIRKWTQDYKEFLESVSADNDKSTDPFIKEFCDNSG
GEIVHFSVCMSEEKLPAVKQEGLLKKLKLSTSISTSNMHLFDSRGVIKKYDTPEQILEEF
FYLRLEFYDKRKKAVLANLEKEMLKCDNKCRFIQGVVEGSIIVSNRKRADLVLELKAKGF
TPFPKKENAPEVSVAGASNDAEESEESSEVPIGQGVSSSDYDYLLLLSINTLTLEKMQEL
LAEREKRVAEVEDLKSTSVKMLWMRDIDALEAKLVEELNKYEKKWEEDRKRIHDGAYAKG
PQKNPRKKTQKTTTKKEPAEDPMEVSQNTMPQTDKAAEVKKPRGRAPAKKKAPAAKVTST
ADEDEDEISDLRQRMAAYNFNSSPDRSEDMESEVSQVPTNNQAAKRDVTKKTTLSSVSEI
DDSDDDIVEIIDDDFETEEKKKKGGRKPANGKAVGKPPPAATKKRAPASKKPQLVGQKLI
TQVLKPAEVSPDKKVRKMRASPFNKKSGSILGRTINVDDDEEEDASEASASTLGSATDAA
PSVVRPKRANRAQMKYVISDSESDQADDDDDTAHEEDSDFNDDED
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccaagaaggctcccctaacctccagcaacaatgccaacatccccccgccc
gaaaccgcccccaccgccggcaccaagaaaacaatcgagcaaatgtaccagaagaaatcg
cagctggaacatatcctcctccgccccgacacctacatcggttccgtggagaaacacaca
caaaacctatgggtctacgacaacgaccagatggttcagagatcggtcacgtatgtcccc
ggcctttacaagatcttcgatgaaattctcgtcaacgcagccgacaacaagcagagggac
cccaagatggactcggtgaaggtcactatagacgtcgaatccaacactattagcgtctac
aacactggggatgggattcctgttgagattcatcaggaggaaggtgtctatgtgccggaa
ttgatatttgggcatttgttgacgagtagcaattatgatgatgatgagaagaagacgacg
ggtgggaggaatggctatggggctaagctcaccaatatattctccaccgagtttgtggtc
gagactgcggatggaaagaggcagaaaaagtacaagcaggttttctccaataacatgggg
gtaaaatctgagcccacactttcgaaatgcagagctagtgagaattggactaagataact
ttcaagccagatttggcaaaatttagcatgacttgtttggaggatgacgttgttgctcta
atgaagaaacgtgtgattgatgttgctggatgccttggtaaaacagtcaaggttgaattg
aacggacagatgtttcagttcaaaacgttttcaaattactgcgaactttatttgaaatct
gtagctgcttctgactcggacccgctcccaagatttgaggagcatgtgcatgatcggtgg
cagatttgtataagtcgaagtgatggacaatttcaacaggtcagctttgtcaatggaatt
gcaacaaccaaaggcgggactcatgttgattatgttactaataagatagcaagccatctt
gttactgttataaataacaagaacaagaagagcaaaagctttgagctcaaacctcataat
gtgaaaaatcatctgtgggtatttgtcaatgcactcattgacaaccctgcttttgactct
caaacaaaggaaaccttgacactccgagcaggaagttttggttcctcttgggatttcaca
tcgaaattcttagacaaagtggctaagtcagacataatgaagaatattgaggaatgggca
gaatttaaacaacagaaggatcttaaaaaaacagatggatctaaaaacaaaagggtcctc
gtagagaagcattccgaagctcatgagtggggtaaaaaggaagcagatcagtgcacgttg
attttgaccgaaggagattctgccaaggcactagcaattgctgggctcacaattatcggg
aaaagacactatggtgtgtttcctctgagaggaaagttgctcaatgtgagggaagcaagc
catactcagataatgcaaaatgctgagtttactaagctcaagcagattcttggtctccag
catggtgtaaaatatgatgataacaaatcactcaagtcactcaagtatggtcacgtgatg
attatgactgatcaggatcatgatggttcccacatcaagggtttgttaatcaatttattc
cattcattctggccagcattgctcaaagttccttcatttcttttggagttcataacccct
atcgtcaaggccaaacatagggatggcagaagaatagaagtgttttataccatgcctcag
tatgaagcatggaaagaaagattggggcctgaagcaaaaaattggaccataaaatactac
aaggggctgggaactagtacaggtgaagaagcaaaggagtactttcgagaccttgaaaaa
cacaagaaagattttgtttgggagaacgatgaagatggtgaggcaattgaacttgctttc
agtaagaagaagatagaagcccgaaaaagttggctccgtcaatttgagcctggtacattc
cttgatgatgtggacaaacacataaagtaccgtgactttgttcacaaggaactgatattg
ttctcaatagcagatgttcagagatcaattccatccatggttgatggattgaaacctgga
caaagaaagatacttttctgttctttcaagaggaactttatcaaggaagcaaaagtggca
caattttgtggttatgtatcagaacattcagcttatcatcatggagagcagagccttgct
ggtaccataattggtatggctcaagattttgtcgggagcaacaatataaatcttctacta
ccaaatggtcaatttggtactcgaggccagggtggcaaagatcatgccagttctaggtac
atttacacgcagctggctccagtaacaagatttttgtttccgaaagcagatgatattcta
cttaactatttgaatgaagatgggcagtcaattgaacctacatggtacataccaatcata
ccaatggttttagtgaatggaagtgaaggaataggcactggatggagttcatttgtacct
aattacaacccttttgacattattagaaatattaggcacttgttgaatgatgaaccaatg
gaggcaatgcatccatggtataaaggattcattggttcaattgaaaaaaatgtgacgaag
gataccggaagctacactgtttgcggaaatatagaggaggtggatgagaatactttaagg
ataactgagcttccaatccgaaagtggacccaagattacaaagagtttttggagtctgtt
tcagctgacaatgataagagcacagatcctttcatcaaggagttctgcgacaacagtggt
ggagaaatagtacatttctcagtttgtatgtcagaggagaaacttccagctgtcaagcaa
gagggtttgctaaagaaattaaagctatccacttctatcagcacaagtaacatgcacctt
tttgattcgcgaggtgtaataaagaaatatgacactcctgaacagattcttgaagaattc
ttttatctaaggctggagttctatgacaaaagaaaaaaagctgtgttggccaaccttgag
aaggagatgttgaaatgtgacaacaagtgtagatttatacaaggtgttgttgaaggtagc
atcattgtgagcaacaggaaaagggctgatttggttcttgagttgaaggcaaagggtttc
actccttttcctaagaaggaaaatgctccagaagtttctgtagctggcgcatctaatgat
gcggaggaatctgaagagtccagtgaagtgccaatagggcagggtgtttcttctagtgat
tatgactacttgctgttgttatcaattaataccttaactcttgaaaagatgcaagagttg
cttgctgagagggaaaagcgtgtggcagaagttgaagacctgaaatcaacatcagtgaag
atgttgtggatgagagatattgatgctttggaagccaaacttgttgaggaattaaataaa
tatgagaaaaaatgggaggaggatagaaaaaggatacatgatggtgcatatgcaaaagga
ccacaaaaaaatccgcgaaagaagacccagaagacaacaaccaagaaggaacctgctgaa
gatcctatggaagtttctcagaatactatgcctcaaactgataaagctgccgaagtcaag
aaaccgagaggcagggcacctgctaagaagaaggcaccagctgctaaggtcacttcaact
gctgatgaagatgaagatgaaatatctgatcttagacagagaatggctgcttacaatttt
aactcttctcctgatcgttcagaagatatggaatcagaggtgtcccaggtgccaactaac
aatcaagcagccaaaagggatgttacaaagaagacgacgttatcaagtgtttcggagatt
gatgacagtgatgatgatattgtggaaatcattgatgatgattttgagactgaagagaag
aaaaagaagggcggtaggaaaccagcaaacggcaaagctgtaggcaaaccccctccagct
gcgacgaagaaaagagctccagcaagcaaaaaacctcagcttgttgggcagaagctgatc
acccaagtactgaagcctgcagaagtttctccggataagaaagtgaggaagatgagagca
tcaccatttaacaagaagagtggttctattcttggaaggactatcaatgttgatgatgat
gaagaagaggatgcttcagaagcctctgcttctactttgggaagtgcgactgatgcagcc
ccgtcagtggttagaccaaagagggccaaccgggctcagatgaagtatgtcataagtgat
tctgagagtgatcaggctgatgatgatgatgacactgctcatgaagaagactctgacttc
aatgacgatgaagattag
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integrated database retrieval system
