Salvia splendens (scarlet sage): 121755822
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Entry
121755822 CDS
T07627
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121755822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121755822
03032 DNA replication proteins [BR:
sspl03032
]
121755822
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
Sm proteins
121755822
U2 snRNP components
121755822
Complex B
U1 snRNP components
121755822
U4/U6.U5 tri-snRNP components
121755822
Complex C
U2 snRNP components
121755822
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121755822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Motif
Other DBs
NCBI-GeneID:
121755822
NCBI-ProteinID:
XP_042007162
LinkDB
All DBs
Position
1:complement(45936612..45938320)
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AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTIIGVDISMNTHLKTVKLTLKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaaattgaacaacgagacagtgtcgattgagctaaaa
aatggcaccgttgttcacggcactatcatcggtgttgatatcagtatgaatacgcactta
aagacagtaaagcttactttgaagggaaagaatcctgtgactatggatcacctgagtgtg
aggggtaataatattcgctattacatccttcccgatagcttgaatctcgagacgttactt
gtggaggagacacctcgggtcaagcccaagaagcccactgcaggaagggctgttggacgt
ggcagaggccgtggccgtgggcgcgggcgtggcagaggccgctaa
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