KEGG   Salvia splendens (scarlet sage): 121755893
Entry
121755893         CDS       T07627                                 
Name
(RefSeq) cyclin-H1-1-like isoform X1
  KO
K06634  cyclin H
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03022  Basal transcription factors
sspl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121755893
  09124 Replication and repair
   03420 Nucleotide excision repair
    121755893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121755893
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121755893
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     121755893
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     121755893
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 121755893
NCBI-ProteinID: XP_042007262
LinkDB
Position
11:complement(64325..68715)
AA seq 285 aa
MEVDVDGSFSYAEPQTDAKASADKHSRPKALKIEEEQLLRAFYEFKIQDVCDALTLPHKI
QATALIYFKRFYLQWSVMEHHPKNIMLTCIYAACKAEENHVSAEQLGIGIEQDHHMILDN
EMLVLQSLGFDLIVYSPYRPLQGFITDMEEFGDANERQPEIMKNFHESAKAEVDKIMRTE
APLLFPPGQLALAALRRSCELHKAIDFERYLKNVHYRQHPAHGISELYLNMNAIDVLINK
LETPTSKDVKHIDRKLKSCLDPASHEKSKKRKHRSKDGSSEMHVM
NT seq 858 nt   +upstreamnt  +downstreamnt
atggaagtagatgttgatggatctttctcttatgctgaaccacaaactgatgcaaaggct
agtgctgacaagcattcacgtccaaaagctctcaagatagaagaagaacaacttttgcgg
gccttctacgagtttaaaatccaagatgtttgtgatgccctcacgcttccccataaaatt
caggccacagctctaatctacttcaaaaggttctatttgcaatggtccgtgatggagcat
catccaaagaatataatgttaacatgcatatatgctgcttgtaaggccgaggagaaccat
gtgtcagcagagcagcttgggatagggatcgaacaggatcatcatatgattcttgataat
gaaatgctggttcttcagagtctaggatttgacctcatagtctattcaccgtatcgacca
cttcaaggctttatcactgatatggaggagtttggtgatgcaaatgagaggcagcctgag
attatgaagaattttcatgaatctgccaaagctgaagttgataaaattatgcgtacggaa
gctccccttctattcccaccagggcagctagcattggcagctttacgaagatcttgtgag
ttgcataaagctatcgactttgagagatacctgaaaaatgtgcactatcggcagcatcca
gctcatggcatttcagagctctaccttaacatgaatgcaattgatgtgttgataaataag
ctcgagacccctacttcgaaagatgtaaagcacatcgataggaaacttaaatcttgcttg
gatccagcttcacatgagaagagcaagaaacgaaagcacagatcaaaggatggttcgagc
gaaatgcatgtcatgtaa

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