Salvia splendens (scarlet sage): 121756065
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Entry
121756065 CDS
T07627
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121756065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121756065
03036 Chromosome and associated proteins [BR:
sspl03036
]
121756065
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121756065
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121756065
PBAF complex
121756065
GBAF(ncBAF) complex
121756065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Glyco_hydro_9
Polycystin_dom
Motif
Other DBs
NCBI-GeneID:
121756065
NCBI-ProteinID:
XP_042007457
LinkDB
All DBs
Position
11:complement(23929941..23936098)
Genome browser
AA seq
767 aa
AA seq
DB search
MPASSSEARARWRKRKRDNSVARKSKLKEHDDGILDDNDDDDDPDLDPPQNHLESEDDPQ
IHTSDRKTQITGEKGDEKLVAGGLKLCEFPVAIKREINMPHSSVFRIVEFERAARYGDSI
GLGQSGVPVLENISYGQLQALSAVPRDNPALLGVPSEETASACGGGSYVITPPRIVAGGG
VTKRLGSAGRVHVVPVHSEWFSPNSVHRLERQVVPHFFSGKSSEHTPEKYMECRNFIVAM
YMENPEKHLAVANCQGLEAGIDNEDLTRIVRFLDHWGIINYCATPPKHEAPKGGTYLCED
SNNELHVPLSALKSIESLIKFDKPKCRLKATDVYPELACQQEEDSDIDSAIREKLSEHQC
NCCSRPIPAVYYQSQKEVDAGLCLDCYHEAGFIAGHSSLDFMKENSTKDYGDLDGDSWSD
QEALLLLEGMQLYNENWNKIAEHVGSKSKAQCILHFVRLPLDGAPLDSIDVPSTSDLSNL
SNHERSEPISNGICLEGEDTESKFPFSSSGNPVMSLVAFLASALGPRVAAACAHASLGSL
SMESSKEGSPGGSLSQHDAEGATLSAEKVISAAEDGLAAAAMKAKLFADHEEREIQRLSA
NIINHQLKRLELKLKQFAEFETLLMRECEQMERTRQRIAAEQALVMSGQFGSAGVQRPMG
LPGVSNCNSAMNNYAGNRQHIQGSQQPFVSGYGNNQPIHPHMSLMQQQQQQQQQQQGMYG
LGPRLPLSAIHPSSSAPNTMFNPTSNSQPSLGYPMLRPLSGTKSGLG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttcctcctcagaagcaagagcaaggtggagaaagcggaaaagggataactca
gtggcgcgtaagtctaaactgaaagagcatgatgatggcatacttgatgataacgatgac
gatgatgacccagatctggaccccccacagaaccatctggaaagcgaagacgatcctcaa
attcatacctctgataggaaaacccagataacaggagaaaaaggggatgaaaagctagtt
gctggtggactgaagttatgtgagtttccagttgctattaagagggagataaatatgccc
cactcatctgtcttccgaattgtggaatttgagagggctgcaagatatggggatagcata
ggcctagggcagagtggggtgccagtgttggagaatatttcttatggtcagctgcaggca
ctttctgcagtgcctcgagacaatcccgctcttttaggggttccctcagaggagactgca
agtgcttgtgggggtggttcatatgtgatcacgccacctaggatagttgctggcggtggt
gttactaaaaggctcgggagcgcagggcgtgttcatgttgtcccagtacattcagaatgg
ttttcaccaaattcagtccatagattggagagacaagtggttccacattttttttctgga
aaatcctcagaacatacacctgaaaagtatatggaatgtcggaatttcattgttgctatg
tatatggaaaaccctgaaaagcacctagctgtggctaactgccagggcctagaagctggt
attgataatgaggacttaactcgaattgtgaggtttctggatcactgggggattatcaac
tattgtgcaactcctcctaagcatgaggccccaaagggtggaacttacttgtgtgaggat
tcaaataacgaacttcacgtccctttgtctgctttgaaatctatagagagcttaatcaag
tttgacaagccaaaatgtaggttgaaggcaactgatgtttatccagaacttgcatgtcag
caggaagaggattctgacattgacagtgctattagagaaaagttatccgagcatcaatgc
aactgttgttcacgacctattcctgcagtgtactaccagtcgcagaaggaggttgatgcg
ggactctgtttggattgctatcatgaggcgggattcattgctggtcactctagccttgat
tttatgaaagagaattccacgaaagattatggagacctggacggggatagttggtctgac
caggaagcgttgctgcttcttgagggaatgcagctttataatgagaattggaataaaatt
gcagagcatgttggctccaaatcaaaagcacagtgcattctccattttgtccgtcttcct
ctagatggcgctccactggacagtattgatgttccaagcacatctgatttgtcgaatttg
agcaatcatgaaagatcagagccaatttcaaatggcatttgcttggaaggggaagatact
gaaagcaaatttcctttctcaagctctggaaacccagtgatgtctctggtggcgtttctt
gcttctgcattggggccaagagtggctgcagcctgtgcccatgcatctttgggttcattg
tctatggagagtagcaaagaagggagtcccggaggttctttgagccaacatgatgctgaa
ggtgctacactatctgctgaaaaagtgatctctgcggccgaagatggccttgctgcagca
gccatgaaggcaaagctttttgctgatcacgaagagcgtgaaatccagcggttatctgct
aatattattaaccatcagttaaagcgattggagctaaagttgaagcagtttgcagaattt
gaaacattgctaatgagagaatgtgagcagatggaaaggaccaggcagaggattgctgct
gaacaggccctcgtgatgtcgggacagtttggttctgctggcgtgcaacggccaatgggg
ctgccaggtgtcagtaattgtaattctgctatgaacaattatgcaggaaatagacagcac
attcaaggctcccagcaacctttcgtttctggatacggaaacaaccaacccatacatccc
cacatgtccctgatgcaacagcagcagcagcaacaacaacaacaacagggaatgtatggc
ctgggtcctaggctgcccctttcagctatacatccatcttcttcagcccctaataccatg
tttaacccgacatccaattctcagccatctctcggctatccaatgctcagaccactatct
gggactaaatctggtttaggctag
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