Salvia splendens (scarlet sage): 121756123
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Entry
121756123 CDS
T07627
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121756123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121756123
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121756123
Hops complex
121756123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_30
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
121756123
NCBI-ProteinID:
XP_042007522
LinkDB
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Position
11:complement(1651525..1657475)
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AA seq
840 aa
AA seq
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MAGVTVAAEWQLLYNRYYRKPELYQMEWKQVDLTRNKIACAPFAGPIAAIRDDAKIVHLY
AESALRKLRIFTSSGRLTAECVWRNPGGRLIGMSWTDDLTLACITQDGTVYSYSVHAELL
STFSLGKECFNFDNSVVDCVFWGNGVVCITEGLEILAVPDFKAPRAVKLADCGLEELPHC
MAVIEPGYAKSGGVEVLLGVGDHVLLVEEGGIKPLAAGIGPLQKMVLSRKGEFVASFTHD
GRLLVMSSDFSREFIDYTCESALPPDQLAWCGSDAVLLYWDDMLLMVGPYDEPVRYIYDE
PIILIPECDGVRILSNTTMEFLHRVPDSTVSIFHIGSTSPPALLYDALEHFDRRSAKAAE
NLKLIQSSLPEAVESCVDAAGYEFDISLQRTLLRAASYGQTFSSHVRRDSLREICQMLRV
LNAVRDVDIGIPLSLQQYKLLTPSVLINRLINAHKHLLALRLSEYLGLSQEVVIMHWTRT
KISASAVIPDATLLQILLDKLKICKGISYAAVAAHADKRGRRKLAAMLVEHEPCSSKQVP
LLLSIGEEYSALVKATESGDTDLVYLVMFHIWKKSSPMEFFSTIQARPLARDLFIKYARC
YKHEFLKDFFLSTGQLQEVAYLLWKESWELAKDPRAKGSSFGPRIKLIEKASNLFAESKE
HIFECNAAEEHAKLLRIQRELEVTTKQAIFLDSSVSDTIRTCIVLGNHRAANKVRAEFKV
ADKRWYWLKCFALATIQDWDALEKFSKEKRPPIGYRPFVEACVEAGKKDEALKYIPKLSD
MGERAEAYAKIGMAREAADAASQSRDSELLSRLRQSFSQNAGGSSIFDTLRDRLLFQALS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtcacggtagcggcggaatggcagctcctctacaaccgctactaccgcaaa
ccggagctctaccaaatggagtggaagcaagtcgacctcacgcgcaacaaaatcgcgtgc
gcccccttcgccggccccatcgccgccatccgagacgacgccaaaatcgtccacctctac
gccgaatccgccctccgcaagctccgcatcttcacctcctccggccgcctcaccgccgag
tgcgtctggcgtaaccccggcggacgcctgatcggaatgtcctggaccgacgacctaacc
ctagcctgcatcacgcaggacggcaccgtctactcctacagcgtccacgccgagctcctt
tccaccttctccctcggcaaggagtgcttcaatttcgacaacagcgtcgtcgattgcgtg
ttttgggggaacggcgtcgtttgcatcaccgaggggcttgagattctcgcagtgccggat
tttaaggcgccgagggcggttaaattggcggattgtggattggaggagctgccgcattgt
atggcggtgatcgagccggggtatgcgaaatcggggggtgtggaggtgctgcttggggtt
ggggatcatgtgttgttggtggaggagggtggaattaagccgttggcggccggaattgga
ccgttgcagaagatggtgttgtcgaggaaaggggaatttgtcgcctccttcactcatgat
ggaaggcttttggttatgtcctctgatttttccagagagttcattgattatacttgtgag
tcagccctcccaccagatcaactagcttggtgcggatcggatgctgtgttactctactgg
gatgacatgttgttgatggtgggtccctatgatgagccggtgcgctacatttatgatgag
ccaattattcttattccagaatgcgatggggtgcgtatattatctaacacaaccatggag
tttttgcatcgagttccagactctacagtatcaatctttcatattggaagcacatcgcct
cctgctttgttgtatgatgccttagagcatttcgacaggcgaagtgcaaaggctgctgag
aacttgaaattaattcagtcttcattgcctgaagctgttgagtcttgtgtagatgctgcc
ggctatgaatttgatatttcattgcaaaggacactattgagagctgcaagttatggtcaa
accttctctagccatgttcgacgtgacagtttacgagagatatgtcagatgctccgtgtc
ttaaatgctgtacgtgatgtcgacattggaattcctctaagccttcagcagtacaagtta
cttactccatcagttctgatcaaccgtctaattaatgcccacaaacaccttctagctctg
cgactatcagaatacctcggcttaagccaagaagttgtaataatgcactggacgcgtaca
aagatatcagcttctgcagtgattcctgatgccactcttcttcagattctacttgacaag
ttgaagatatgcaaaggaatatcttatgcagctgttgctgctcatgctgataagcgtggc
cgcaggaaattagctgctatgctagttgaacatgagccatgctcctctaaacaggtccct
ctcttgctaagtattggggaagaatattcagcacttgtgaaggctaccgaaagtggagac
actgatcttgtttatcttgtcatgtttcatatctggaagaagagttcgccaatggagttt
ttttcaacaatacaggctagacctcttgcacgtgatttgtttatcaaatacgcaaggtgt
tacaagcatgagttcttgaaggacttctttctatccactgggcaactccaggaggtagct
tacctcttgtggaaagaatcgtgggaacttgcaaaagatccaagggccaaaggatcatct
tttggtccacgcataaaactaatcgaaaaggctagcaatctttttgcggaatcaaaagaa
catatatttgagtgcaacgcagctgaggaacatgccaaactgttaagaattcaacgtgaa
ttggaggtaacaacaaaacaggctatttttctggattcaagtgtcagcgacacaattcgc
acatgcattgttctgggaaatcatcgtgctgcaaataaagttagagctgaattcaaggtt
gctgacaagcgatggtattggcttaaatgctttgctctggcgacaatccaagactgggat
gcgctggaaaaattttcgaaagagaagagaccaccaattggttatcgtccatttgtggaa
gcttgcgttgaggcgggtaagaaagatgaagcactgaagtacataccaaagctttcagat
atgggagagagagctgaagcttacgctaaaatcgggatggccagggaagctgcagatgca
gcatctcaatccagggatagcgaactgctatcgagattaagacagtcgttttcacaaaac
gctggaggttcttcgatctttgatactcttcgcgaccgcttattgttccaagccctgtct
tag
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