Salvia splendens (scarlet sage): 121756150
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Entry
121756150 CDS
T07627
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121756150
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121756150
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121756150
Protein phosphatases and associated proteins [BR:
sspl01009
]
HAD phosphatases
Fcp/Scp phosphatases
121756150
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121756150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
CEPT76_peptidase
Motif
Other DBs
NCBI-GeneID:
121756150
NCBI-ProteinID:
XP_042007549
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Position
11:complement(27899018..27903525)
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AA seq
640 aa
AA seq
DB search
MSKYESLTVKDAVHKLQLFLLDGIKDENHLLAAGSLISLGDYNDVVTERTIAEMCGYPLC
PNPLPSDRPHKGRYRISLKEHKVYDLQETYMYCSSTCLINSRAFAANLQEERSSDLNPAK
LSRIVKLFEESNLDTTVDMGKNGDLGISELKIQEKTGREAGKLSMEEWIGPSNAIDGYVP
RSDKNLESLQLNNNRKAAKKGKGPKHRLSDPNVQDIMSFDMNFTSTIITQDEYSVSKAAP
SVKAKESRGKLSANSVNCERKPLQNPAASLTDKNEVQPKRSDISMGSTGADDNVKAPEDI
SSACQSDDAWAATVPRSSIKTSDSKKSVRWADEKTDFDGQNLEEYQEFKEEKAALVTPHS
AVEEVGEEESYRFSSAEACAEALSRAAEAVASGKSDASDAVSEAGVIILPPPHEVGTSKS
EENADIIEIDPVQLKWPLKPGVLSSDLFDSEDSWYDSPPDGFNLQLSTFSTMFMALFSWI
SSSSLAYIYGKEESFHEEYLSVNGREYPHKIVLSDGRSAEIKHTLAGCLARALPTLVTEL
RLPVPVSTLEQGLGRLLDTMSFTYPIPAFRMKQWHVIVLLFLDALSVSRIPSLTQYMLGR
RAIIPKVLEGAQIGSEEFEIMKDLVIPLGRAPQFSTQSGG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtatgaatcactgacagtgaaggacgcagttcataagcttcagctcttcctt
ctagatggaatcaaagacgaaaaccatctattagctgctggttcattgatatccctcggt
gattacaacgatgtagtcaccgagcgcacgatagctgagatgtgcggctacccactctgc
cccaaccctttgccatccgaccgcccgcacaaggggcgttaccgcatctcactcaaggag
cacaaagtctacgaccttcaagagacgtacatgtattgctcgagtacttgtttgatcaat
agccgagcgtttgctgccaatttgcaggaagagagatcctcggatctcaaccctgcgaaa
ttgagcagaattgttaagctatttgaagagtcgaatttggacactaccgtggatatgggc
aagaacggagacctaggtatttccgagttgaagattcaggagaaaactggtagagaagct
gggaaattgtccatggaggagtggattggtccgtcaaacgcgattgatggctatgtgcca
cggagtgacaaaaacttggagtcacttcaattgaacaacaatagaaaagctgctaaaaag
ggaaaagggcctaagcatcggctctctgatccaaatgtgcaagacattatgtcctttgac
atgaacttcacaagtactatcattactcaagatgagtatagcgtttccaaagctgctcca
tcagtgaaggctaaagaatcaagaggaaagttgagtgctaacagtgtaaattgtgagagg
aagccattgcaaaacccagctgcttcattgactgacaaaaatgaagttcaaccgaaaagg
tctgatataagtatgggttctactggagcagatgacaatgttaaagcaccagaggatatt
tctagtgcttgccaaagtgatgatgcctgggcagctactgttccgaggtcctctataaag
acttcggattcaaagaaatcagtccgctgggcggacgagaagactgattttgatgggcaa
aatcttgaagagtatcaagaatttaaagaagaaaaagcagctttagtaacaccccattca
gcagttgaggaagtcggtgaggaggagtcatatagattttcatctgctgaagcctgtgcg
gaggctctaagccgagcagctgaagctgttgcatcaggaaaatcagatgcatctgatgct
gtatctgaagcgggcgtaataatactaccacctcctcatgaagtgggtacttctaaatct
gaagaaaatgctgatattatcgagatagacccggtgcagttaaagtggcctcttaaacct
ggagttttgagttctgatttgttcgactccgaggattcttggtatgatagtcccccggat
gggttcaacttgcaattgtcgactttttcaacaatgtttatggcactcttttcctggata
tcatcgtcctctttagcatatatatatggaaaggaagagagtttccacgaggaatacttg
tcggtcaatgggagggagtatcctcacaagattgttctgtcagatgggcgctctgcggag
atcaagcatactcttgctggctgccttgctcgagccttacccactcttgtgactgaactc
aggcttcctgtaccagtttcaactcttgagcaaggactgggtcgcttactagatacaatg
tcttttacctatccaattcctgcatttaggatgaaacaatggcatgttattgtcctgttg
tttcttgacgctctttctgtcagtagaattccatcgctgacccagtatatgttgggtaga
agagctataattcccaaggttcttgagggtgcacagattggttccgaagaatttgagata
atgaaggatctggtcatcccacttggccgagcacctcaattctcgactcagagtggaggc
tag
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