Salvia splendens (scarlet sage): 121756190
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Entry
121756190 CDS
T07627
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121756190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121756190
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121756190
Membrane trafficking [BR:
sspl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121756190
Atg1 complex
121756190
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121756190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121756190
NCBI-ProteinID:
XP_042007610
LinkDB
All DBs
Position
1:46221048..46225811
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AA seq
605 aa
AA seq
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MDLHSYPHGEHGRFEQIFNQFLLKSLHIILDSRVPMNRPPSRGGEIRKSDRWFNLVLGDR
PAAMDSLSFWNRSLMEPMVIDIILVQESRYSLSEHDSRSTLATEMPAETVIERWVVQYEH
QRSMAPQIGDAFYKKTYKKSIILLRSVYSMLRLLPAYKAFRKQQSFKQNCGFEINYKVCS
FGSPLLRSEEESMKNYSFIPIDAQQGCLSVSVMYRKDLSDFNLDSCVSHPIEIISDYVGS
PLTDPMRAFPCTSSEKGHSISFQTRGRQSAPPSPFQPPHSWSSGLQRELSSQQSQPYSAS
PPLYRSPYEYSSSPTEAYIQRNQNQRFPANQKAPCDEILSPPFSSSPSPSPPTKNVIPFH
NRRHPETAPMSIPHPMIARSPRYLSPNLSDPNRNSLPPLSPRNTKHDSSSHESPSGIRSI
RRLDSTRTGEMSNTPTNAGPKLSRDSKEDSGRFSSLLSSSSSPRVGLSRTSSRLSFQDDF
GDCDCPFIVDDVDPPDNQTSSNLVARNCSEVSSLAPSTMKKSQDAAVGALVHMLKTAPPL
RQESCYYNTQSSKTEFEGEVGAASEFFKPRKASDAFEELKVYRQMKDLLLSKSAAHLVSK
EKTEF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcacagctatcctcatggtgaacatggaaggtttgagcaaatattcaatcag
tttcttctaaagagcttgcacattattttggattcaagggttccaatgaaccggccgcct
agccggggaggcgaaataagaaagagcgacagatggtttaatttagtgttgggggatcgc
cctgcagctatggatagcttaagtttttggaatagaagtttgatggaacctatggtgatt
gatattatactcgtgcaagagtcacgttactctttgtcagagcatgattctcgctccact
ctggccacggagatgcctgctgagacagttatagagaggtgggtggttcagtatgagcat
cagaggtcaatggctcctcaaatcggtgatgccttttataagaagacatacaagaaatca
ataatcctattgcgctcggtttattcaatgctgagactccttcctgcatataaggccttt
cgtaaacaacagtcatttaaacagaattgtggctttgagatcaattacaaggtctgctcc
ttcggttctccattgttgagatcagaggaagaatcaatgaagaactattcttttattcct
attgacgcccaacaaggttgcctatctgtatctgtgatgtaccgtaaagatctatctgac
tttaatctggattcttgtgtatcgcaccctattgagatcatttcagattacgtaggtagc
cctcttactgatcctatgagagcatttccttgtacctcgtccgagaagggtcattctata
tccttccagacaagagggaggcaatcagctcctccatcaccatttcaaccgcctcacagc
tggtccagtggtctccaaagggagctttcatcacaacagagccaaccatatagtgcatct
ccaccattatatcgctcaccgtacgagtattcatcttctcctactgaggcatacatccaa
agaaatcaaaaccaaaggttcccggctaatcagaaagcaccctgtgatgaaatactctcc
cctccattctcatcatctccttctccatctccccctacaaagaacgtaattccttttcat
aatcggcgtcatccagaaactgctccaatgagtattcctcatccgatgatagctagaagt
cctagatacctttctcccaatttgtccgacccgaataggaattctcttccacccctatcc
ccgagaaacaccaagcacgactcgtcatctcatgaatcaccatctggaataaggtcaata
aggagactagattcaaccagaactggagaaatgagcaacactccaactaatgctggtcct
aagttgtctcgagactcaaaagaggactctggacggttttcaagtttgctgtcttcaagt
agttctccacgtgttgggttatcgaggacctccagtcgattgtctttccaggatgacttt
ggtgattgtgactgtccatttattgttgatgacgtagatcctcctgataaccaaacaagt
tcaaatctcgtcgcaagaaactgttcagaagtttcttcactagcaccctcaacaatgaag
aaatcgcaggatgctgctgttggtgcccttgttcacatgctgaagacagctccgcctctc
cgccaagaatcctgctactacaacactcagtcatctaagactgaattcgagggagaagtt
ggagctgcttccgagttttttaagcctcgaaaagcatcagatgcctttgaagaactcaag
gtatacagacaaatgaaagatttgctactttccaagagcgcagctcatctggtcagcaag
gaaaaaaccgagttctaa
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