KEGG   Salvia splendens (scarlet sage): 121756199
Entry
121756199         CDS       T07627                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03030  DNA replication
sspl03410  Base excision repair
sspl03420  Nucleotide excision repair
sspl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121756199
   03410 Base excision repair
    121756199
   03420 Nucleotide excision repair
    121756199
   03430 Mismatch repair
    121756199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sspl03032]
    121756199
   03036 Chromosome and associated proteins [BR:sspl03036]
    121756199
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121756199
DNA replication proteins [BR:sspl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121756199
  DNA Replication Termination Factors
   ELG1-RFC complex
    121756199
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121756199
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121756199
  Check point factors
   HRAD17(Rad24)-RFC complex
    121756199
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase AAA_16 Rad17 Viral_helicase1 RuvB_N AAA_5 AAA_24 RCF1-5-like_lid AAA_11 nSTAND3 AAA_25 AAA_19 AAA_assoc_2 AAA_28 MeaB bpMoxR DNAX_ATPase_lid ABC_tran AAA_18 AAA_30 IstB_IS21 AAA_3 AAA_7 NTPase_1 RNA_helicase DO-GTPase1 KTI12
Other DBs
NCBI-GeneID: 121756199
NCBI-ProteinID: XP_042007621
LinkDB
Position
11:complement(13270649..13273579)
AA seq 331 aa
MASASSSSSGPEIPWVEKFRPTKVSDIVGNQDAVARLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV
KNMVRQVIDGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA
HMRICDGVGSYLQMSGLLAKLALARETAKAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgtcagcatcttcatcgtcgtcggggcctgagatcccatgggtggagaagtttcgc
cccactaaggtgtctgatatcgtcggcaatcaagacgccgtcgcccgcctccaagtcatc
gcccgcgatggcaacatgcccaatctcattttggctggtcctcctggaactggtaagact
actagcatattggctcttgctcatgagctcctcgggccaaattatagagaggcggtcttg
gagctaaacgcatcagacgatagaggaattgatgttgtgagaaacaaaataaagatgttt
gcccagaagaaagttacattgccccctggaaggcacaagattataattttggacgaagct
gacagcatgacttcaggagctcaacaagctttgagaaggacgatggaaatatattctaat
tctacacgttttgggctagcttgcaacacttcatcaaagattattgagcctattcagagt
cgatgtgctcttgttcgattttctagattatccgatcaagagatccttggacgtctcatg
gtggtggttgcagcagaaaaggtaccttatgttccagaaggtcttgaagcaattattttc
actgctgatggtgatatgaggcaagcattgaacaacttgcaagccacaaatagtggattt
gggtttgttaatcaagaaaatgttttcaaggtttgtgatcagccccatcccttgcatgtc
aaaaatatggtacgccaagtgattgatgggaaattcgacgatgcttgtgctggattgaag
cagctctatgatttgggctattcaccaactgatatcattaccactctattccgaatcata
aagaactatgatatgcctgagtatctgaagttggaatttatgaaggagacaggatttgct
catatgaggatctgtgatggagttggttcatatcttcaaatgtctggtttgctcgcgaag
cttgcattggcccgcgaaacagccaaggcagcttag

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