KEGG   Salvia splendens (scarlet sage): 121756220
Entry
121756220         CDS       T07627                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121756220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121756220
   03036 Chromosome and associated proteins [BR:sspl03036]
    121756220
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121756220
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121756220
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 121756220
NCBI-ProteinID: XP_042007647
LinkDB
Position
11:33946486..33951110
AA seq 348 aa
MSAFGGSTANANPNRSVEVASPPSDSVSSLCFSSKANHLVATSWDNQVRCWEVQKQGTTI
TTVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKDLA
WIPEMSLLVTGSWDKTLRYWDLRQQNPTWVQQLPERCYALTVKHPLMVVGTADRNLVIFN
LQNPQTEFKRVVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDEAQASKNFTFKCHR
DGNDIYSVNSLNFHPVHQTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPITSSAFNHDGS
IYAYSVCYDWSKGAENHNPSTAKTNIYLHQPLDAEVKGKPRVGTSNRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtctgcattcggcggttcaacggctaacgccaatcctaatcgctcagttgaggttgcg
tcacctccgagtgattcagtttcgagcctgtgtttcagttctaaggccaatcacttggtc
gccacgtcttgggataatcaggtacgatgttgggaggtgcagaaacaaggaaccactatc
accactgttcctaaggcttcgatatcacatgaccaaccggtcttatgctcagcttggaag
gatgatgggacaactgtattttctggtggctgtgacaaacaagtcaagatgtggccatta
ttatccggtggacaacctgtaactgtagccatgcacgatgctcctgttaaagatcttgct
tggatcccagaaatgagtcttttagtcacaggaagctgggataagacacttaggtattgg
gatctgagacagcagaatccaacttgggtgcagcagcttcctgagcggtgctatgcgctt
actgttaaacatccccttatggttgttggcactgcggataggaatcttgtcattttcaac
ctacagaaccctcagacagagttcaagagagtcgtgtcaccattgaagtaccagactagg
tgtttagctgcattcccagatcagcaaggcttcttagttggctcaattgaaggcagagtt
ggggtacaccaccttgatgaggcacaagcaagtaaaaattttacttttaaatgtcacaga
gatggcaatgacatttactctgtcaactcactgaactttcatcctgtgcaccagacattt
gccactgctggatctgatggtgcctttaacttttgggacaaagatagcaaacagaggctt
aaggctatgctgaggtgcagtcagccgataacttccagtgctttcaaccacgatgggtcg
atatatgcgtattcggtttgttatgactggagcaaaggtgctgaaaatcacaatccatca
acagcaaagaccaatatttacctacaccaacccctggatgccgaggtcaagggcaaaccc
cgggtcggaacaagcaaccgaaagtga

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