Salvia splendens (scarlet sage): 121756278
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Entry
121756278 CDS
T07627
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121756278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121756278
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121756278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
121756278
NCBI-ProteinID:
XP_042007712
LinkDB
All DBs
Position
11:complement(30094906..30098046)
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AA seq
263 aa
AA seq
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MEDDYSNGDINVETSKADRSVWLMKCPPIVSKAWQSSAASASVDSPPVAKVVVSLDLLQP
DDSSALQFTMEMAGSEVVNMPKSYSLNMSKDFVPMGVFSESSTQGRSAMEGKVEHKFDMK
PHHANIEEYRKMCRERTNKSMVKNRQIQVINNDRGVHMRPMPGMMGLITSTSKDKKKPAP
VKGTDMKRTRRDRGELEDIMFKLFENQPNWTLKQLVQETDQPAQFLKEILNELCIYNKRG
TNQGTYELKPEYKKSVEDTGAEP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgactacagtaatggcgatatcaacgtcgaaacctccaaagccgacagatcg
gtgtggctcatgaagtgccctcccatcgtctccaaggcctggcagtcctccgctgcctcc
gcttctgtcgactcgccgcccgttgccaaagtagtcgtttctctcgatctcctccagccg
gacgattcctccgccctccaatttaccatggagatggcagggagtgaggtcgtgaatatg
ccgaaaagttactctcttaacatgtccaaggactttgttcccatgggtgttttctccgag
tcgtcgactcaaggaagatctgctatggaaggaaaggtggaacataaatttgatatgaaa
ccccaccatgcaaacattgaagagtacagaaaaatgtgccgggaaaggacaaataagtcc
atggtcaagaatagacaaatccaggttatcaacaatgatcgtggtgtacacatgaggccc
atgccgggaatgatgggattgattacgtcgacttctaaagataagaaaaaaccagctcca
gttaaggggactgatatgaaaagaactagaagggatcgcggggaactggaagatataatg
tttaagctatttgaaaaccaacctaactggacgctcaagcagcttgttcaagagactgat
caacctgcccaatttttgaaagagatattaaatgagctctgcatatacaataaaagagga
acaaaccaaggtacttatgagctcaagccagagtataagaaatctgttgaggatacaggt
gctgaaccatga
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