Salvia splendens (scarlet sage): 121756286
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Entry
121756286 CDS
T07627
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121756286
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121756286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
121756286
NCBI-ProteinID:
XP_042007722
LinkDB
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Position
11:complement(6901955..6908933)
Genome browser
AA seq
750 aa
AA seq
DB search
MKRERELVELSDDEWTPHSESFKPSRVLKPNPPSPNPPPPIESFAFSKATSNSHEILLLD
TSSSDGADPGNGDDLEDLEDDDAELEVTKRASTSTRGSRFVIDDDDEEDDDGAAADDEDG
DYSDPEVWMEEEEQEDDVVKKALRKCGEISAELKQELYGTSAVACDQYSEVELGSAAAAR
IVTQDDVNDACGAGDDFQPTLKPYQLIGVNFLMLLYRKKIGGAILADEMGLGKTVQAITY
LTLLKYLEDDPGPHLIVCPASLLENWERELKKWCPSFTVLQYHGSARSAYSRELNSLGKA
GRPPPFDVFLVCYSLFERHSLQQKEDRKILRHWKWSCVLMDEAHALKDKNSFRWKNLMSV
ARNSRQRLMLTGTPLQNDLHELWSLLEFIMPGLFETGDVDLKKLLNAEDRDLICRMKSIL
GPFILRRLKSDVMQQLVPKTQKIEYVCMGKEQEDAYKEAIENYRAISQARFLKSSETSLS
NVAKILPRRQISNYFLEFRKIANHPLLVRRAYTDDDVLRIAKMMHPKGVFGFECTLERVV
EELKSYNDFSIHRLLLFYGDTDLKGTLSDEHAMVSAKCRALGELLPKLNRAGSRVLIFSQ
WTSMLDILEWTLDVIGVTYRRLDGSTQVKERQTIVDTFNKDTSIFACLLSTRAGGQGLNL
IGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLTLD
AAVLESGVVEDEGEMPDKTMAEILSSLLLH
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagagagagaattggtcgaactctccgacgacgaatggactccccactccgaa
tccttcaaaccctcgcgcgtcctcaagcccaatcccccttctccaaaccctcctcccccc
atcgaatccttcgctttctccaaagccacttccaattcccatgaaatcctcctactcgac
acctcttcctccgatggcgccgaccccgggaacggcgacgaccttgaggatttggaggac
gacgacgctgagctcgaggtcactaagagagcttccacgagcactcgggggagcaggttc
gtgatcgacgacgacgacgaggaagacgacgatggcgccgccgcggatgacgaggacggc
gattatagcgacccggaggtgtggatggaggaggaggagcaggaagatgatgttgttaag
aaggctttacgaaaatgtggggagatttcggctgaattgaagcaggaattgtacggaaca
agcgcggtcgcatgtgatcagtactcggaggtggaattggggtctgctgctgctgctagg
attgtcactcaggatgacgtgaatgacgcatgcggagctggggatgatttccagcctaca
ctaaagccgtaccagctaattggagtcaattttcttatgcttttgtataggaagaaaatt
ggtggagctatcttggcagatgagatgggtcttggaaagactgttcaggccataacgtat
ctgactctgttaaagtatctggaagatgatccggggccccatttaattgtatgtcccgct
tctctcttggaaaattgggaaagggagcttaagaagtggtgtccatcatttactgtgctt
cagtatcatggttctgcacggtcagcttattcaagagaattaaattctctcggaaaggct
ggacggccaccgccatttgatgtttttcttgtgtgctattcgctttttgaacgccacagt
ttgcagcagaaagaagaccgcaaaattctgagacattggaagtggagttgtgttctaatg
gatgaagctcatgcactaaaggataagaatagtttcaggtggaaaaatttgatgtcagtt
gcaagaaattcaaggcagcgtttgatgcttacaggcacaccactgcagaatgatttgcat
gagctgtggtcgttgttggagtttataatgccaggcctttttgaaactggggatgttgac
ttgaaaaagttgttgaatgcagaagacagagatctaatttgtagaatgaagtccattctt
ggaccatttatcctaagacgattaaaatcagatgtaatgcaacagctagttccgaagacg
cagaagattgaatacgtttgcatgggaaaagaacaagaagatgcttataaagaagcaatt
gagaattatcgtgcgatatctcaagctcgttttctgaagtcatctgaaactagcttaagt
aatgtggccaaaatactccctcggcgacaaatttctaattactttctggaattccgaaag
atagcaaatcatccattattagtgagacgcgcctacacagatgatgatgttcttcgtatt
gctaaaatgatgcatccaaaaggcgtgtttggctttgaatgtacgttagagcgcgtggtc
gaggagcttaagagctacaatgacttctctattcatcggctcctacttttctatggtgat
actgacttgaaaggaactctctctgatgaacacgctatggtttctgcaaaatgtcgagca
ttgggtgaacttctccctaaattaaatcgtgctgggagtcgcgtccttatttttagccaa
tggacgtcgatgcttgatatattggagtggactttggatgtgattggtgtgacctacagg
cgccttgatggaagtacacaggtgaaagagagacagacaattgtggataccttcaacaag
gacacttcaatatttgcatgtttgttgtccacaagggccggaggacagggattgaacttg
atcggtgctgataccgttataatccatgacatggattttaatccccagattgatcgtcaa
gcagaagaccgatgtcatcgcattggccaaacaaagccagtcacaatataccggcttgtg
acgaagggcacggtggatgagaacgtttatgagattgcaaagaggaaactaacactggat
gcagctgtccttgaatctggagtggtagaagatgaaggcgagatgcctgataagactatg
gcagagatattatcttccttattgttgcactaa
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