Salvia splendens (scarlet sage): 121756419
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Entry
121756419 CDS
T07627
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121756419
03410 Base excision repair
121756419
03420 Nucleotide excision repair
121756419
03430 Mismatch repair
121756419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121756419
03036 Chromosome and associated proteins [BR:
sspl03036
]
121756419
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121756419
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121756419
DNA Replication Termination Factors
ELG1-RFC complex
121756419
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121756419
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121756419
Check point factors
HRAD17(Rad24)-RFC complex
121756419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
AAA_5
AAA_24
RCF1-5-like_lid
AAA_11
nSTAND3
AAA_25
AAA_19
AAA_assoc_2
AAA_28
MeaB
bpMoxR
ABC_tran
DNAX_ATPase_lid
AAA_18
AAA_30
IstB_IS21
AAA_3
AAA_7
NTPase_1
DO-GTPase1
RNA_helicase
KTI12
Motif
Other DBs
NCBI-GeneID:
121756419
NCBI-ProteinID:
XP_042007903
LinkDB
All DBs
Position
11:14150420..14153193
Genome browser
AA seq
364 aa
AA seq
DB search
MRGGISGFASNHLSIGFKQSRVARVLWLNEGSAMASASSSSSGPEIPWVEKFRPTKVSDI
VGNQDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYREAVLELNASDD
RGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRTMEIYSNSTRFGLA
CNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEAIIFTADGDMR
QALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIDGKFDDACAGLKQLYDLGY
SPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYLQMSGLLAKLALARET
AKAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcggaatttctggatttgcttcgaatcatctttccataggatttaagcagtcc
cgcgtagcgagggttttgtggctgaatgaaggctctgcaatggcgtcagcatcttcatcg
tcgtcggggcctgagatcccatgggtggagaagtttcgccccactaaggtgtctgatatc
gtcggcaatcaagacgccgtcgcccgcctccaagtcatcgcccgcgatggcaacatgccc
aatctcattttggctggtcctcctggaactggtaagactactagcatattggctcttgct
catgagctcctcgggccaaattatagagaggcggtcttggagctaaacgcatcagacgat
agaggaattgatgttgtgagaaacaaaataaagatgtttgcccagaagaaagttacattg
ccccctggaaggcacaagattataattttggacgaagctgacagcatgacttcaggagct
caacaagctttgagaaggacgatggaaatatattctaattctacacgttttgggctagct
tgcaacacttcatcaaagattattgagcctattcagagtcgatgtgctcttgttcgattt
tctagattatccgatcaagagatccttggacgtctcatggtggtggttgcagcagaaaag
gtaccttatgttccagaaggtcttgaagcaattattttcactgctgatggtgatatgagg
caagcattgaacaacttgcaagccacaaatagtggatttgggtttgttaatcaagaaaat
gttttcaaggtttgtgatcagccccatcccttgcatgtcaaaaatatggtacgccaagtg
attgatgggaaattcgacgatgcttgtgctggattgaagcagctctatgatttgggctat
tcaccaactgatatcattaccactctattccgaatcataaagaactatgatatgcctgag
tatctgaagttggaatttatgaaggagacaggatttgctcatatgaggatctgtgatgga
gttggttcatatcttcaaatgtctggtttgctcgcgaagcttgcattggcccgcgaaaca
gccaaggcagcttag
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integrated database retrieval system
