Salvia splendens (scarlet sage): 121756437
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Entry
121756437 CDS
T07627
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121756437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121756437
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121756437
BRITE hierarchy
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GFIT
Motif
Pfam:
DUF7885
LRR_6
F-box-like
LRR_4
LRR_At5g56370
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
121756437
NCBI-ProteinID:
XP_042007922
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Position
11:complement(23828230..23830533)
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AA seq
338 aa
AA seq
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MEIIEWNDIPVELLLRILSLLDDRTAVVASAVCRGWRDSLSWGITRLSLSWCKRNMNSLV
LSLAPKFTKLRSLILRQDAPQLQDDAVEEITSHCHELQELDLSKSFLLTDRSLYAIARGC
PDLEKLNISGCSAFSDSALGYLTGCCRKLKFLNLCGCVRTASDRALKSIGCNCNELQYLN
LGWCDRVGDEGIMSLAYGCPELRAIDLCGCVLITDDSVVALANSCLHLRSLGLYYCQNIT
DRAMYSLAQSRVKGKKEGWASVRNRYEEEEGLTNLNISQCTALTPPAVQALCDSFPALHT
CSGRHSLIISGCLSLTSVHCACAVQAHRGSTALPRLAH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagattatcgagtggaatgatattccggtggagcttctgctgaggattctgtctctg
ctagatgatcggacggcggtggtagcttctgccgtctgccgcggctggagagactccctt
tcttggggcatcactcgtctctctttatcttggtgcaagagaaacatgaacagtctggtc
ctatcgctggctcccaaattcacaaaactgcgatctctgattctacgacaagatgcacct
cagctccaagacgacgctgttgaggaaatcacgagccattgccacgagctgcaagagttg
gacctcagcaagagcttccttcttacagaccggtctttgtatgccatagctcgtggctgt
cccgatctcgagaagctcaatataagtggctgctcggccttcagtgactctgccctcgga
tacctaactggctgttgcagaaaattgaaattcctaaatctttgtggatgtgttaggact
gcctctgatagggctctaaagtccattggatgcaactgcaacgaattacaatatttgaac
cttggttggtgcgaccgcgttggtgatgaaggcataatgagcttagcctatggctgcccc
gaactcagagctatcgacttgtgcggctgtgttctcataactgacgacagcgtagtagct
ctggccaacagctgccttcacctgaggtcccttggtctgtactactgccagaacatcacg
gatcgagccatgtactcgctggcacagagtcgggtgaaggggaagaaggaagggtgggcg
tctgtgaggaacaggtacgaggaggaggaaggcctaacgaatctgaatatcagccagtgc
accgccttaacgcctccagcagtgcaggcgctgtgcgactcatttcctgctctccacacg
tgctccggtcgccattctctgatcatcagcggctgtctcagcttaacatcggtgcactgc
gcttgtgctgtccaggcacaccgcggctcgactgcactgcctcgcttagctcactga
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