Salvia splendens (scarlet sage): 121756471
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Entry
121756471 CDS
T07627
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121756471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121756471
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121756471
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121756471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
121756471
NCBI-ProteinID:
XP_042007957
LinkDB
All DBs
Position
11:complement(9765901..9771087)
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AA seq
724 aa
AA seq
DB search
MGSPGSSAMAIASRVGLSEPISTGGPSESDVSKTRDLGKFLVDAGLYESRDEAIKREEVL
GRLDQIVKTWVKNVSRIRGYNGSVIQEANAKIFTFGSYRLGVHGPGADIDTLCVGPKYAT
RNEDFFGELHRMLSEMPEVQELHSVPDAHVPVMRFKFNGVSIDLLYANVSLRIIPEDLDI
SQESILQNVDDQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRLWAKRRGVYSNVTGFL
GGINWALLVARICQLYPNALPSMLVSRFFRVYNLWRWPNPVMLCPIQEGSLGLSFWDPRR
NYKDRSHLMPIITPAYPCMNSSYNVSTSTLQVMMEEFHRGNEICEEIESNKLNWETLFDS
FLFFEAYTNYLQMDIAAETDEDLMSWKGWVESRKRLLTLKIERDTNGVLQCHPHPGEISD
KSKPLHHSYFMGLRRKQGANPQEAQPFDLRMTVEDFKHDVYAYSFWKPAMLIHVCHVKRK
DLPIFVFPGGVRPSPPRKRSESRTILKSLASCPVQTDAAVSRKRRKLDEPPNRGTSLTES
SSNSACTSDATSFLKKQIETNFSAPKSEDGVAGNLSPLAQGIPGLDQSERAAEPSASAGA
FPTPIAIEKHVMEQSSAQIPLIHQDSSEAFDGLEGLLKNETQNNEEAEGVTQPELFPDKQ
AVEVAIGTTSIIQFQGKADLEELEPLELAVSTAIASAAAKVPAQKQLIRFCFTSLPKATE
SVQS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcccaggatcaagtgctatggctattgcatctcgtgtgggattatcggagccc
atctcgactggtggcccttcggaatctgatgtttctaagactcgtgacttaggaaagttt
cttgtagatgcgggattgtatgaaagtcgcgacgaagctatcaaaagagaggaagttctt
ggcagattagaccagattgtgaagacatgggtgaagaatgttagccgtattagaggttat
aatggatcagtaatccaagaggcgaatgcaaagattttcacatttggttcttaccggctt
ggcgtacatggccctggtgctgatattgatacgttgtgtgtcggaccaaaatatgccact
cgaaatgaagacttcttcggtgaacttcacagaatgctatcagagatgcctgaagtacaa
gagttgcattctgtaccagatgcccatgtaccggtgatgaggttcaagttcaatggtgtc
tctatagatctactttatgcaaatgtgtccctgcggattatccctgaagatttggatatt
tctcaagaatctattctccaaaatgtggacgaccagactgttcgaagtctcaatggttgt
agagtaacagatcaaatcttgcgcctggtcccaaatatacagaattttcgtactacactg
cgctgtatgaggctgtgggcgaagcggcgtggagtttattcaaatgttactggtttcctt
ggtggtatcaattgggcattgcttgttgcccgcatctgccagctgtacccaaatgctctg
ccaagcatgttggtatcccgcttttttagggtatacaatttgtggcggtggccaaatcct
gtaatgttgtgtccaattcaagaaggatctttaggactttcattctgggatcctagaaga
aattacaaggacagatcacacctgatgcccattataacccctgcatatccctgcatgaac
tccagctacaatgtctcaacaagtacattgcaagtcatgatggaagaatttcatagggga
aatgagatatgcgaggaaatagaatcaaacaagcttaactgggagactctctttgattca
tttttgttctttgaagcgtacacaaattatctgcagatggacatagcagcagagactgat
gaagacttgatgagttggaaaggttgggttgagtccaggaaacgtttgcttaccttgaag
attgaaagggacacaaatggcgtccttcagtgccatccacaccctggtgaaatttctgat
aaatcaaagccacttcaccatagttatttcatggggttgcggaggaagcaaggtgctaac
cctcaagaagctcaaccatttgatttaaggatgacagttgaggattttaagcacgatgta
tatgcatactcattctggaagccggcaatgttgatccatgtgtgccatgttaagcggaag
gacctacctatctttgtcttccccggtggagtccggccttctccccctagaaaaagatct
gagagtcgtacaattctgaaatcgcttgcatcctgccctgtccaaactgatgctgctgtc
agcaggaagaggaggaaactagatgaaccccccaatagaggaactagcttaacagagtct
tcaagcaacagtgcatgtaccagtgatgcaacttcatttttgaagaaacaaatcgaaacc
aattttagtgccccaaaaagcgaagatggagttgctgggaacctctctccacttgcccag
ggaattccaggacttgatcaaagcgagcgtgctgctgaaccttcagcttctgctggtgct
ttccctactccaattgcaatagagaaacatgttatggagcagtcttctgcacagattcct
ctcattcaccaggattcttctgaagcatttgatgggctcgaaggtttgttgaagaatgaa
acccagaacaatgaggaggcagaaggagttacacaaccagagttgttcccagacaagcag
gctgtagaagtagcaatcggcaccacctccattattcaatttcaaggcaaggccgactta
gaggagctagagccgctggaactggctgtatcaactgcaattgcgtctgcagcagcaaaa
gtgccggctcagaagcagcttatcaggttctgtttcacctcgttgcctaaggcgaccgag
tcagtgcaatcatga
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