Salvia splendens (scarlet sage): 121756564
Help
Entry
121756564 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121756564
03015 mRNA surveillance pathway
121756564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121756564
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121756564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121756564
NCBI-ProteinID:
XP_042008066
LinkDB
All DBs
Position
11:3663257..3668017
Genome browser
AA seq
430 aa
AA seq
DB search
MAKPARGRPASPSGSDSRSSSRSRSRSISRSRSRSYSGSGSRSRSSSRSRSRSKSISSSS
SLSRSGSSRSPPPRKSPAEGARRGRSPPPQTKKSSPPPRKASPAPESLVLHVDQLSRNVN
ENHLKEIFGNFGEVVNVRVAMDHVVNLPKGFAYVEFKIRADAEKAQLYMDGAQIDGKVVR
AKFTLPERKKVASPPKAVATTSRRDASKAEDTAVDGDRDDEKRLRDVSPRRKPLSPPRRR
SPGPRRGSPGPRRGSPGPRRGSPRREQDSPPPPRRRADSPYRRGDSPPIRRRAPLSPARG
RSPSPPRRFRSPPRSSPRRIRGSPVRRRSPPPPRRRSPRRLRSPPRRSPVGRRRSRSPMR
RPARSPSRSPSPRRGRVPPSRRGRSYSPSPSPPRRGPRRVSRSRSPRRPIRGRNNSSSSS
STSSSPPPKP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacccgcccgcggccgcccggcgtcgccgtcgggatcagattctcgctcttct
tcccgctctcgctctcgttccatttcccgttcccgctcccgttcttactccggctcaggc
tcccgctcccgctcctcttccaggtcgcgctcccgctctaaatccatatcctcctcctcc
tctctttctcgcagcggcagctcccgcagccctccgccgcggaaaagtcctgctgaaggg
gccaggagaggtcgctcacctccaccacaaactaagaaatcttccccacctccaaggaaa
gcttcacctgctcctgaatctcttgtgctgcatgtggaccagctcagtaggaatgttaac
gaaaaccacttgaaagaaatattcggtaattttggtgaagtggtgaatgtacgggtggca
atggatcatgttgttaaccttcccaaaggatttgcgtatgttgagttcaagattagggca
gatgctgaaaaggcccagttatatatggatggtgctcaaattgatggtaaagttgttagg
gcgaagtttacattacctgagagaaagaaggttgcttctcctcccaaagctgttgcaacc
acatcaaggagagatgcctcaaaagccgaggacactgctgtggatggtgatagagatgat
gaaaaacgcctaagagatgtttctcctcgtcggaagccactctctccacctcgaaggaga
tctcctggaccacgaagaggatctcctggaccacgaagaggatctcctggaccacgaagg
ggatctcctagacgagagcaagattctcctcccccacctcgccgtagagctgattctcct
taccgacgaggtgactcccctccaattaggagaagggctcctctatctcctgctagaggc
cgctcaccttctcctccgagacgcttcaggtcaccgccaaggtcatctccaagaagaata
cgtggtagtcctgttcgtcggcgatctcctcctccacctaggcggcgttcaccaagacgt
ctccgaagtcctccaagaaggtctcctgttggtcgcagacgtagtcgctctcctatgagg
aggcctgctcgttcaccatcacgatcaccctctcctagaagaggtcgagtgccaccttct
agacgtgggaggtcttattctccgtcacctagtccaccacgcaggggacctcgtagggta
tcacggagccgtagccctcgaaggcctatcagagggaggaataacagcagcagcagcagc
agcaccagcagctctcctccacctaagccataa
DBGET
integrated database retrieval system
