Salvia splendens (scarlet sage): 121757053
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Entry
121757053 CDS
T07627
Name
(RefSeq) sm-like protein LSM7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121757053
09123 Folding, sorting and degradation
03018 RNA degradation
121757053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121757053
03041 Spliceosome [BR:
sspl03041
]
121757053
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121757053
mRNA degradation factors
5'-3' decay
Lsm complex
121757053
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121757053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
KNOX2
Motif
Other DBs
NCBI-GeneID:
121757053
NCBI-ProteinID:
XP_042008465
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Position
1:complement(46981291..46985637)
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AA seq
112 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGARLVTETLKGYDQLLNLVLDEAVEFLRDPEDPLKT
TDQTRLLGLIIPLLLYFISRVTRPLLFLLCFILSLKPYTIIPSVASFTTHFF
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaggaaaccgttctggacctggctaagtttgtcgacaagggtgtccaa
gtaaaactaactggtgcaagactagtgaccgaaactcttaaaggctatgaccaattgctc
aatcttgttttggatgaagcagtagaatttcttagggatccagaagatcccctgaagaca
actgatcagacccgtcttcttggcttaataatccccttgctactgtatttcatctcaaga
gtcacgaggcccctactctttttattgtgtttcatactttcactaaagccctacactatt
atcccctctgtggcatcatttacaacacatttcttttga
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