Salvia splendens (scarlet sage): 121757100
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Entry
121757100 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121757100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121757100
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121757100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
121757100
NCBI-ProteinID:
XP_042008518
LinkDB
All DBs
Position
12:5827568..5831388
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AA seq
476 aa
AA seq
DB search
MEVDQGKLFIGGISWDTNEDRLKDYFETYGDVVEAVIMKDRTTGRARGFGFVVFADPAVA
ERVVKEKHMIEGRTVEAKKAVPRDDQYLINRNSGSMQGSPGTGRTKKIFVGGLASTVTEN
DFKTYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR
AVPKELSPGPSRSPLVGYNYGFTRPNNFLNSYAQGYNLSSVGGYGVRMDGRYSPLASGRA
GFSPFGSPAYGLGVNMEQGLSGGFGGGSNFNSNLGYGRVLNPYFANNQSRYNTPIGYNTN
NSRGESFLSTSPRSVWGNSGLNASPNSGGSASYFGSGSGGFGVFGNNVTNWGTSPVAGSL
GGSSSGYNGGNFGYRGGDNSFAAGAGGFGRNTGNGVAPTSSFPASTGDYEGSYGDFYRSG
SVYGDPTWQTTSSELDNSNSYGYGLGDSEDVAAKDSEDYVVGYDLPNRQSSRGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatcaaggtaagctctttatcggtgggatttcttgggacacgaatgaggat
cgtcttaaagattattttgaaacatatggagatgttgtggaagcagtgatcatgaaagac
cgaaccacaggtcgtgctcgtggatttggctttgttgtctttgcagaccctgccgttgct
gagagggtggttaaggagaagcacatgattgaaggacgaactgttgaagccaagaaagct
gttccaagggatgatcaataccttataaaccgaaacagtggcagcatgcaaggttcacca
ggaactgggcgcactaaaaagatatttgtaggaggattagcatctacagtcacagagaat
gattttaaaacttattttgatcagtttggaatcataacagacgtcgtggtgatgtacgac
cacaacacgcagaggccaagaggttttggttttataacatatgattcggaggacgcagta
gatagggttttgcacaaaacttttcatgaactcaatggtaaaatggtcgaggtaaagcga
gcagttcccaaagagttgtctccagggcctagccggagcccgcttgttggttataactat
gggtttactagacccaacaatttcctcaatagctatgcccagggatataatcttagctca
gttggaggttatggagttaggatggatggtagatacagtccactggctagtggtcgagct
ggtttctcacctttcggttctcctgcatatgggctgggtgtcaatatggagcaaggttta
agtggtggctttggaggaggctctaacttcaacagcaacctaggttatggccgtgttctg
aacccttattttgccaataaccagagcaggtacaacacacctattggttacaatacaaat
aacagcagaggtgaatcttttctaagcacttcacctagaagtgtttggggaaacagtgga
cttaatgcttctccaaatagtggcggctctgcttcatactttggatctggaagtggtggt
ttcggagtctttggaaataatgtgacaaactggggtacttccccggttgctgggtccctc
ggaggaagctcttctgggtacaatggtggaaactttgggtatagaggtggagataacagt
tttgctgcgggagcaggaggatttggaagaaacactggaaatggtgtggccccaacatct
tcattccctgcctcaactggtgactatgagggatcatatggggacttttaccgtagtggt
tctgtatatggtgacccaacttggcaaactacatcttctgagctcgataattctaattcg
tatggttatgggcttggagactcagaagatgttgctgctaaagattctgaggattatgtg
gtcggctatgaccttccaaataggcaatccagtagaggtattgctgcgtag
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