Salvia splendens (scarlet sage): 121757297
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Entry
121757297 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121757297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121757297
03036 Chromosome and associated proteins [BR:
sspl03036
]
121757297
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121757297
Coactivators
SAGA/TFTC/STAGA complex
121757297
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121757297
STAGA complex
121757297
TFTC complex
121757297
SAGA complex
121757297
SLIK complex
121757297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
121757297
NCBI-ProteinID:
XP_042008769
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All DBs
Position
12:5926130..5931194
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AA seq
540 aa
AA seq
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MSIVPKETIEVIAQSIGISNLSPDVLPALAADVEYRIREIMQESIKCMRHSKRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFERAAGHKDLFYIEEKDVEFKEVIEAPLPKAPLDTTV
VAHWLAIDGVQPAIPENPPPEALQMLSLPADNRKTEVKEDGASVDIKLPIKHVVSQELQL
YFEKITELTVTRSESPLFKAALVSLATDSGIHPLVPYFTLFVADEVSRNLNNFSLLFALM
RLVRSLLRNPHIHIEPYLHQLMPSVLTCLVAKRLGNKFSDNHWELRNFTASLVASICKRF
GQVYYNLQPRVTKTMLTAFINPSKTLPQHYGAVRGIAALGANVVRLLILPNLDPYLRLLE
PEMQLEKQKNEIKRHEAWLVYGALLRAAGLCVYDRLKMLPSLPSPPARTVCRSNSKVVTT
SSNKRKATIDNMMHQPPLKKLATDSSMGANSLPADIAGASGGYSTNTGAADSSMASGNNN
VAGSSNRREIGGGQGFKTSSALEQAWKEDTDAAQLLPSLYEYFGESMLTFVPLPEASLFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtaccgaaagaaacaattgaggttatagcccagagcattggcatcagcaat
ttatctcccgatgtgttacctgctctggctgccgatgtcgagtaccgtattcgagaaata
atgcaggaatctatcaaatgcatgaggcattcgaagagaactactttaactacggacgac
gttgatagtgccctcggtttaagaaatgtcgagccaatatatggatttgcttctggagat
ccactgcgattcgaacgtgcagcagggcacaaggatttgttctatatagaagaaaaggat
gtggaattcaaggaagtgattgaagctcctctacctaaggccccactggacaccacagta
gttgctcattggttagctattgacggagttcaacccgctattcctgaaaatccccctccc
gaagctcttcaaatgctttcacttcctgcagataacagaaagactgaagtcaaagaggat
ggagcatctgttgacattaaattacctataaagcatgtggtttcacaggaacttcagctt
tactttgaaaaaattaccgagttgactgtgacgagatccgagtcccctttatttaaagct
gcattagtgagcttggcaactgactcagggattcaccccttggttccttattttacactt
tttgttgctgatgaggtttctcggaatttgaataacttttctctactttttgctttgatg
cgtcttgtccggagccttcttcggaatcctcatatacatatcgagccatatctgcaccaa
ctgatgccctcagtgctgacatgcctggttgctaaaagattaggaaataagttctctgac
aatcactgggaactgagaaatttcactgctagtctagttgcttcaatatgcaagagattt
ggccaggtttattacaatctccagccacgtgtaaccaagacaatgttgacggctttcatc
aatccatcaaaaactctccctcaacattatggtgctgttcggggcatagcagccctcgga
gctaatgtggttcgattacttattcttcccaatcttgatccttatttgcggcttctggag
ccagaaatgcaactagagaagcaaaagaatgagatcaagaggcatgaagcctggcttgta
tatggggctctattgcgcgcagctggtttgtgcgtctatgatcggctgaagatgctacct
tctctgccatccccaccagcacgtactgtctgtaggagcaatagcaaagtcgtgactact
tcttcaaataaacgtaaagccaccatagataacatgatgcaccaaccaccgttgaagaaa
ctggcaacagacagttctatgggtgcaaactctctgccggcagacatagcaggagctagt
ggtggatattcaacaaatactggagctgcagactcatcaatggcctcagggaacaacaat
gtggctggatcaagcaacagaagagagataggtggtggtcaaggattcaagacttcatct
gctcttgagcaggcgtggaaggaggatacagatgccgcacaattgctgccctcactgtat
gaatattttggtgaaagcatgttaacatttgttcctttacccgaagcgtccttattcttg
tga
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