Salvia splendens (scarlet sage): 121758115
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Entry
121758115 CDS
T07627
Name
(RefSeq) tRNA pseudouridine synthase A 1-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121758115
Enzymes [BR:
sspl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
121758115
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121758115
Prokaryotic type
121758115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
121758115
NCBI-ProteinID:
XP_042009484
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All DBs
Position
12:32695791..32699097
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AA seq
357 aa
AA seq
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MTKSFLFFSFLFSVETGMFTLSHAPPRLSFAGTFQKSGGLAKSPSRLFHSLSVGSPPLKD
LSDEGEDGRMLPSLGYKWCLIISYDGTRFSGWQYQTSTPTVQCLLEEALIRITKLERDHL
CVVGAGRTDAGVHAWGQVAHFTTPFNYDCLAGVHKALNGLLPPDIRIREMRSVPPEFHAR
FSVTSKIYNYRIYNDTIMDPFLRLHVYHSTYKLNPAAMRDAAKNFVGKHDFSAFANTSRN
DRIPNPVKNIFRFDVIETGPVLHLEVEGTGFLYRQVRNMVALLLQVGREAVPPDIVSNIL
ASRDRKELAKFTLAVPPHGLCLHAVNYNEDQLQLPSGCPATSRGRHHTISKCKLPYY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcttttcttttcttttcttttcttttctctgtggagacgggcatgttcacg
ctctcccacgcgccgccgcgtctctctttcgctggaactttccagaagagtgggggccta
gccaaatctccgtcccgcctctttcacagcctttccgtcggatcgccgcctctcaaggac
ttgagtgatgaaggggaagatggtagaatgctcccttctcttggatacaaatggtgcttg
ataatctcttacgatggcacccgtttttcaggatggcaatatcaaacgtcaaccccaact
gtacaatgtttactggaagaggctctaattcgaattacaaaattagaacgtgatcacctc
tgcgttgttggtgcaggccgaacagatgcaggagtccatgcctggggtcaggtggcacac
ttcaccacacctttcaattatgactgcttagccggtgttcacaaagcactaaatggtctt
ctccctcccgatatcagaatcagagagatgagatctgtcccacctgaatttcacgcgcgc
ttttctgttacaagcaagatttacaattacagaatttacaacgacaccatcatggatcca
tttctgaggctccatgtgtaccacagtacttacaaactcaatcctgctgccatgagggat
gctgcaaagaattttgtagggaagcatgacttctctgcttttgctaatacttcgcgcaat
gataggataccaaatccggtcaagaatatcttccgctttgatgtgattgagacgggacct
gtgttgcaccttgaagttgaaggaacaggttttctatacagacaagttcggaatatggtc
gcgttgttgcttcaagtcgggagagaggccgttccacctgacatcgtctccaatatcttg
gcatctcgtgacaggaaggagttggccaaatttaccttggcagttcctcctcatggtttg
tgccttcatgctgtcaactacaacgaggatcaacttcagcttccctcgggttgccctgca
acgagccggggtaggcaccatactataagcaaatgtaagctcccatactattga
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