Salvia splendens (scarlet sage): 121758201
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Entry
121758201 CDS
T07627
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121758201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121758201
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121758201
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
BOFC_N
Motif
Other DBs
NCBI-GeneID:
121758201
NCBI-ProteinID:
XP_042009556
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Position
12:complement(25708117..25711729)
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AA seq
895 aa
AA seq
DB search
MEVARRRTRRQWDDFYLQLHDERKQQQKKTDNAVETLNADGQGFLSESDVKQNDGVNVDD
GDVNTKSDDAAEDSDEPASESETISVDEDDDCKGGDDESCGVAEKSRRRKNLRKESDFRL
LLHNSDSDCDVLTENADERFLRSRKRRRIVNMEKEKGRVKILGKKGSHSAKHLNLIRILV
DSMNAFDEKQNVPESALPSRFRFEDEVVLPPHKSEHEKFIDELFHDLELGLRQIDCTNPV
AESDELKTTVEIDGSCCYRGKHQAILDEQIGLICKNCDIVIMDIKHVLPPFHVPTWEGRD
KRYYRDEFQGSNFSNIQFDGTDSSIPGSTSCMKGTVWDLVPGVKEDMYSHQREGFEFMWR
NIAGDTKLEKLKQTLADDARGCIISHAPGTGKTRLTIVFLQSFLKLYPACSPLIIVPKGM
LLTWEAEFKKWNFNVAFHNLNKKELSGKEHTVAIEVLEEIESGVLSQDCIRLLKLYSWER
GGSVLGVSYKLFEKLAGQRNGKSLQHKKIREVLLQRPTLLVLDEGHTPRNNNSLIWKALT
KVSTQRRIILSGTPFQNSFMELFNTLCVVNPKFADQDNSVRGPRWKNLDNSSGINRGTML
GMRAVLEPYIHVHKGTVLEEKLPGLRHTLVFLHPTKSQQLLLEKACKEEMFKMIRMVSLV
SVHPSIRAVVKEYFTRREEIATDIDAGVKAWFLLKLVRFADALGERVLIFSQFLDSLIFI
KEQLESIYSWNEGREVVYIDGQVDEKKRQESIYRFNDETSEAKVLLASERACSEGINLTG
ASRVVLLDTMWNPSVEKQAICRAYRLGQKRVVYVYRLFTSGIEVGQYKQQHLKERISQGL
FSLGEEHSEYAGAVAEDKVLDAMRSLENFDQIFEKIISQPKESDLIKTFGMEGQK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagccagaagaagaactaggaggcagtgggatgatttctatctacagctacac
gacgagcggaaacaacaacagaagaagactgataatgctgttgaaactttgaatgccgat
ggtcaagggtttttgagtgaatcggatgtgaaacagaatgatggcgtgaatgtggatgat
ggcgatgttaatactaagagtgatgatgcggcggaggattcggatgagcctgcctctgaa
tctgagacaatttctgttgacgaagatgatgactgtaaaggaggtgatgatgaatcatgt
ggtgttgctgagaagagtaggaggagaaagaatctgagaaaagagagtgattttaggttg
ttacttcacaattccgattcggattgtgacgtattgacagaaaatgccgatgagaggttt
ttgaggtcaaggaagaggagaagaatagtgaatatggagaaggagaagggtagagttaag
attttggggaaaaaagggtctcattctgcaaaacatctcaacttgatcaggattttggtg
gactccatgaatgcattcgacgaaaaacaaaatgtgcctgaaagtgcccttccgtcgagg
ttcagatttgaggacgaggtggtcctccccccacacaaatcagagcatgaaaagttcata
gatgaactctttcatgatctagagttaggattgcgacaaatcgattgcactaatcccgtg
gctgagagtgatgagcttaagaccactgtggagattgatggaagttgttgctaccgaggg
aagcatcaagctattcttgatgaacagatagggctcatttgcaaaaactgtgatattgtg
atcatggacataaagcatgtcttaccaccttttcacgtaccaacttgggaggggcgagac
aagaggtattaccgtgatgagtttcaaggctccaactttagcaacattcaatttgatggc
actgattccagtatacccggttcaacaagttgcatgaaaggaacagtatgggatttagtc
cctggtgttaaggaagatatgtactctcatcagcgagagggcttcgagttcatgtggaga
aacatagcaggagacaccaaacttgagaaactgaagcagactcttgctgatgatgcaaga
gggtgcataatctcacatgccccaggcactggaaagactcgtctcaccatagtgttcctg
cagtcattcctgaagctgtatccagcctgcagccccttgatcatagttcctaaagggatg
cttctgacatgggaagctgagttcaagaaatggaacttcaacgtagcctttcacaatcta
aataagaaagagctatccggaaaagaacatacagttgctattgaggttcttgaggaaatt
gagagtggagtcttaagtcaagactgcattcgcctgcttaaattgtattcctgggagaga
ggtggtagcgtcttaggggtcagctacaaactatttgagaagcttgctggacaaagaaat
gggaaaagtttgcagcataagaaaatcagggaggtgcttcttcaaaggccgaccctttta
gtgcttgatgaagggcatacacctcgtaataacaatagcctgatatggaaggccttgacg
aaagtctcaacacagcgacgtatcatcttgtcaggcactccattccaaaacagtttcatg
gagctattcaacactctgtgcgtcgtaaatccaaagtttgcagatcaggacaacagcgta
cgtggaccaagatggaagaatttggacaactcatctggcataaataggggcacgatgttg
gggatgagggctgtgctcgaaccatacattcatgtgcacaagggaactgtgctagaggaa
aagcttcccggactgaggcacacgctagtattcttgcatccaacaaagtctcaacagcta
ctgctagaaaaagcttgcaaagaggagatgtttaagatgattcggatggtatccctagtc
tctgttcatccttcaatacgtgcagtagtgaaggagtacttcactagaagagaggagatt
gcaacggatattgatgctggggtgaaggcatggtttcttctgaagctagtacgctttgct
gatgcactcggtgagagggtgctcatcttcagccagttcttagactctcttatattcatc
aaagagcagcttgagtccatttattcttggaatgaaggaagagaagtggtttacattgat
ggacaggttgatgagaagaaacgccaagaatccatatatcgcttcaatgatgaaacaagc
gaggcaaaggtgcttcttgcatctgagagagcttgctcggagggtataaatctgacaggg
gcttcaagagttgtgctgctggataccatgtggaatccttcagtggaaaagcaagcaatc
tgtagggcttaccgtcttggacagaagagagtggtgtatgtatatcgcctatttacatct
ggaattgaggtcggacaatataaacagcagcatctgaaagagcgcatatcacagggatta
ttctctcttggggaagaacatagtgaatatgcaggagcagttgcagaggacaaggttttg
gatgccatgcgcagtcttgaaaatttcgatcagatatttgagaagattatttcccaacca
aaggaatccgacctcatcaaaacattcggaatggaagggcagaagtag
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