Salvia splendens (scarlet sage): 121758413
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Entry
121758413 CDS
T07627
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121758413
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121758413
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121758413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
AF_0924
Motif
Other DBs
NCBI-GeneID:
121758413
NCBI-ProteinID:
XP_042009755
LinkDB
All DBs
Position
12:33569121..33571246
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AA seq
383 aa
AA seq
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MLYLWVFLCCISYFMGFFAASGNVVMIAKNVTLSFDDVEALFAPTVKESGIGGTVSIAEP
LDACSLLTNEIVASMNGTRYPFVLIIRGGCSFEDKVRRAQAAGFEAAIVYDNDTTDLRPM
AGNPVGININAVFVSKVCGETLASYAAGAADLQLWIVPSYENPAWSIIALSFTSLAGVSA
VLATCFFVRRHRFRGERPLAPRVREFHGISSRLVKAMPSLIFTAVLEDNCTSQTCAICLE
DYSVGEKLRVLPCRHKFHAVCVDTWLTSWRTFCPVCKRDAKTKTTRPTASESTPLLSASV
HPPSTSLPSSLESSSPMQIGPSVPLVYNLSDAPRLQPEGACAVSSSTTNYTSLSSLNSIY
MLPYIPGAGNVSSGCLGSSSHET
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatttgtgggtatttttgtgctgcatttcctatttcatgggttttttcgcagct
tctggaaatgtggtgatgattgcaaagaatgtaactttgtctttcgacgacgttgaagct
ctctttgcacccacagtgaaagagtctggaataggtgggactgtgagcattgcagagcct
ttggatgcttgctcgttactgaccaacgagatagttgcaagtatgaacggcaccagatat
ccattcgtcttgattatcagaggaggatgtagcttcgaggacaaggttagacgagctcaa
gctgctggattcgaagcagccattgtctatgacaacgacaccaccgatttacgaccaatg
gctggaaatcctgttggtataaacataaatgcagtttttgtgtcgaaagtttgtggggaa
acacttgctagctatgctgctggtgcagctgatttgcagctgtggatagtcccgagctat
gagaacccagcgtggtctataatagcgctgtcgttcacttctttagccggtgtttcagct
gtgttggctacttgtttcttcgtgagaaggcaccggttcagaggtgaaaggcctctagcg
ccccgtgtgagagagttccacgggataagcagtcgtctggtgaaggcaatgcccagcttg
atctttacagctgttcttgaagacaactgcacctctcagacgtgtgctatatgtcttgaa
gactacagtgtcggagaaaagctcagggtccttccttgtcgacacaaattccacgctgtt
tgtgtcgacacgtggctaacgtcgtggagaacattctgccctgtctgcaagcgtgatgca
aaaaccaaaaccacgaggcctaccgcgtcagagtccacaccgttgctgtcagcttccgtt
cacccaccttcgacttctttgccatcttccctggagtcatcgtcacccatgcagataggg
ccttcagttccactcgtctacaacctgagtgatgcgcctcgcctccaacccgagggtgct
tgtgcagtgtcgtctagcacgaccaactacacttcgttgtcttctcttaactccatctac
atgctgccatatattccgggtgccggtaatgtttcgtcggggtgtttaggttcttcaagt
cacgagacgtag
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