Salvia splendens (scarlet sage): 121758613
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Entry
121758613 CDS
T07627
Name
(RefSeq) KH domain-containing protein At5g56140-like isoform X1
KO
K14945
protein quaking
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121758613
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121758613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
HHO5_N
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
121758613
NCBI-ProteinID:
XP_042009920
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All DBs
Position
12:complement(4905915..4910469)
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AA seq
290 aa
AA seq
DB search
MSSGRYMAYSPSPSAPHSPHIATTRTAASALIEQEKYLTDLLAERNKLNPFMAVLPNCYR
MLNQEILRVTTLLGSASVLEQSMLEHASPLASGGIYSNGGANANRWASSPFQSEMSSVMQ
SSSTPNWLGSQGSSSGLIVKRTIRVDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECRV
LIRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLIQSREILEDLLKP
MDEAQDYYKKQQLRELALLNGTLRDDVSQMSGSVSPFHNSLGMKRAKTRV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgggaggtacatggcttactcgccctccccctccgccccccactctcctcac
atcgccaccacccgcaccgccgcctccgctctcatcgagcaagagaagtacctcacagac
ttgctggcagaacgtaacaagctcaatccttttatggctgtgcttccaaattgctaccgg
atgctgaatcaggaaatattgcgtgtaactacactgttggggagtgcatcagttttagaa
caaagtatgcttgaacatgctagccccctggcttcaggaggaatatattcaaatggagga
gctaatgcgaacagatgggcatcatcaccatttcaatcagaaatgtctagtgtaatgcaa
tcttcctccacaccaaactggcttggttcccaaggtagctcttctggtctcatagtcaag
cgaacaatcagggttgatattccagttgaccaatatcctagttataattttgttggacgt
ctccttggtcctagagggaattctttgaagcgagttgaagcaactaccgagtgccgtgtt
ctaatcagagggcgtggcagcatcaaggatccaacaagggaggagatgatgagaggtaaa
ccgggatatgagcacctcaacgagcctcttcacatacttgtcgaggcagaactgccagtt
gagatcatcgatgctcgtctaattcagtcacgcgagatactagaagatttacttaagcct
atggacgaagctcaagactactataagaagcaacagctgcgagaactggcactgctgaat
ggtacacttcgagatgatgtctctcaaatgtctggctctgtatcacccttccacaacagc
ctgggaatgaagagggcgaaaaccagggtgtga
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integrated database retrieval system
