Salvia splendens (scarlet sage): 121758631
Help
Entry
121758631 CDS
T07627
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121758631
03036 Chromosome and associated proteins [BR:
sspl03036
]
121758631
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121758631
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121758631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
Lsm_interact
MOSP_C
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
121758631
NCBI-ProteinID:
XP_042009943
LinkDB
All DBs
Position
12:27646108..27657842
Genome browser
AA seq
841 aa
AA seq
DB search
MADSETLVTAPSNSLEEDSNANDVLMPDAKNATEGSDSDSESESDSDSEDDSQAKAQIEA
LETQLYNNPSDYDTHVQYIKALRKQGELEKLSQAREAMSSLFPLTPDMWREWAKDQTTIS
TSLEALPQIEKLYERGVSDYMSVDLWCDYLNFVQEHDPSVKECSAVGISKARNLFERALT
AAGLHVDGGHHIWELYREFEQAIIFTIDETDSAAKEKQIQRVRNLFHRQLSIPHTDLKST
LAAYQAWEADQGRLSNANDEELDDLPSHVVSVYQKALEMLNDRAHQEEKISKSNTDSEKL
QDFMAYLKFEHSSGDPARIQILYERAIAVFPVSADLWLDYTQYLDKTFKTARIVRDSYYR
ATRNCPWVGELWVRYLLALERSHASEEELSTVFERSLLCTFSGYDEYLNVFLTRVDGLRR
RMSSSTAVKAEVDYAIIRDIFQRASDYLSPHLKNTESLLRLHSYWARLELKYGKDLTVAR
GVWESLLKICGSMVEAWQAYIAWEIETGNTKEGRSLYKRCYSKRFPGTGSEDICHSWLLF
EREYGSLEEFDIAVQKVSPRLQELQLFRLQQESKNVIPAANERENPSKKSAREKRKLTSH
SVEEQPPAKHHKSVAQDSSKKIQNDKGQPGKSAEPSEAAELKNKNADHPKNQEIQDKSSK
KSIQFNDQCTAFVSNLNLQATVDDLHNFFADAGGVVAVRLLKDKFTRKSRGLAYVDFSDD
AHLAAALQKNKKIFMGKKLSILKSDPKQGRKKEVAGRSGRAEHGRTDTRETPKGKMDIQP
QSPTSGHGDVQLKGRNTFAVPRNVKPLGWSSRSTPPSDTASEQEADNPKSNDEFRKMLMK
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctgaaaccctagttactgctccatctaatagcctagaagaagacagcaac
gctaacgatgttttgatgcccgacgctaagaacgctactgaaggctccgactccgactca
gaatccgaatcggactccgactctgaagatgactcccaggcgaaggctcaaattgaagca
ctagaaacacagctctacaataatccatcggattacgatactcatgtccaatatatcaaa
gctctgcggaagcaaggggagttagagaagctgagtcaagcaagggaagcaatgagttcg
ttattcccactgactcctgatatgtggcgcgaatgggctaaagatcaaactactattagc
acctcgctagaagcactccctcagatcgaaaagctgtatgaacgaggagtgtctgattat
atgtctgttgacctttggtgtgactacttaaattttgtacaagaacatgatccttctgtc
aaagaatgttctgctgtgggcatctcgaaagcaagaaatctgtttgagcgtgcacttact
gctgctggcttgcacgttgatggaggtcaccacatatgggaactgtacagggaatttgaa
caagcgataatttttaccattgatgaaactgactctgcggcaaaagaaaagcagatccag
cgcgtgcgaaatttatttcatcgccagttgtctattccccataccgacctaaaatcaaca
cttgctgcttaccaggcctgggaagctgaccaggggcgtctcagtaatgctaacgatgaa
gagttggatgaccttccatctcatgttgtctctgtatatcaaaaggcattggagatgctg
aatgaccgtgctcatcaagaagaaaagatttccaagagcaatacagattctgaaaaactt
caagatttcatggcttacttgaaatttgagcactcatctggtgatccagcacgtatacag
atcttgtatgaacgagctatagctgtgtttcctgtatcagctgatctatggcttgactat
acacagtatctggataaaacattcaagactgccagaattgtgagggacagttattatagg
gccacaaggaactgtccttgggtgggtgaattgtgggttcgatacttgcttgccctggag
cgtagtcatgcttctgaggaagagttatccacagtatttgaacgatcactgctgtgcact
ttttcaggatatgatgagtatctaaatgtattcctcacaagagtagatgggttaaggcgg
agaatgtcttcatctacagctgtgaaggctgaagtggactatgcaattataagggatata
tttcagcgtgcatcagattacctatccccacatctcaaaaacacagaaagcttacttcgc
ttgcacagttattgggctcgactggagttgaagtatggaaaagatttgaccgtggctcgt
ggtgtttgggagagcttgcttaaaatatgtgggtctatggtggaagcttggcaagcttat
atagcatgggagattgagacgggcaatacaaaagaaggcagatccctttacaagagatgc
tatagtaagagattccctggaacaggctcagaggatatttgccattcatggctgctcttt
gagagagaatatggatcacttgaagagtttgatattgctgttcaaaaggtgtctcctcgc
cttcaagaattgcagctgtttaggttacaacaggagagcaaaaatgtcattcctgctgca
aatgagagagaaaatccatccaagaaaagtgcccgggaaaagaggaagctaacttcacat
tcagtagaagaacagccaccagctaagcatcacaaaagtgttgctcaggactccagtaaa
aaaattcagaatgataaaggtcagccagggaaatcagctgagccaagtgaagctgctgag
ttaaaaaacaaaaatgctgaccatcctaagaaccaggaaatacaggataaatcctctaaa
aaatctattcaatttaatgatcaatgcactgcctttgtttccaatctgaatctccaggca
actgttgatgatctgcataatttctttgctgatgctggtggagttgttgccgttcgatta
ctaaaggacaaatttaccaggaaatcaagagggttggcatatgtggatttctcggacgat
gcacaccttgcagcagctttacaaaagaacaaaaaaatctttatgggcaagaagttaagc
attttgaaatcagatcctaagcaaggcaggaagaaagaagttgctgggcgtagtggcaga
gcagaacatggaagaacagacacacgagagactcccaaggggaaaatggacattcagcca
caatctcccacttctgggcatggtgatgttcagcttaaggggaggaacacatttgcagta
ccaagaaatgtgaaacctctcggttggagcagtcgaagcacaccaccatctgatacagct
agtgaacaggaggccgataaccccaaatctaatgatgagttcaggaagatgctaatgaaa
tcatga
DBGET
integrated database retrieval system
