Salvia splendens (scarlet sage): 121758783
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Entry
121758783 CDS
T07627
Name
(RefSeq) TATA-box-binding protein 2-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121758783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121758783
03021 Transcription machinery [BR:
sspl03021
]
121758783
Transcription factors [BR:
sspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
121758783
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121758783
RNA polymerase III system
TFIIIB
121758783
RNA polymerase I system
SL1/TIF-1B
121758783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
121758783
NCBI-ProteinID:
XP_042010110
LinkDB
All DBs
Position
12:complement(21121386..21125639)
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AA seq
256 aa
AA seq
DB search
MEYHQVLEGSQPVDLSRHPSGIVPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKNEAQSKLAARKYARVIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLALAHRAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRD
ETYAAFENIYPVLTGFRKVPQWYGNVVLCASVFITIAVILFICTDYLDEWIYMCLRSPSC
SRVMGISSLVMEVDLA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaataccatcaagttctggaagggagccaaccagttgatctgtccaggcatccctcc
ggaattgttccaactctccagaatattgtctctactgtcaatttggactgcaaattagat
cttaaatctatagcattacaggctcgtaatgcagaatacaatcccaagcgttttgctgct
gtgattatgaggattcgagaaccaaaaactacagcactaatatttgcatctggaaagatg
gtgtgtacaggagccaagaacgaagcacaatccaaattggctgcccgtaagtatgctaga
gtaattcagaagcttggcttccctgctaaattcaaggatttcaaaattcagaacatagtt
ggatcatgtgatgtaaaatttcccattcgacttgaagggctggcccttgctcaccgtgcc
ttttccagttatgagccggagctgttccctggattaatctatcgaatgaaacaacctaag
attgtgctgctcatttttgtctctgggaagattgtccttactggagctaaggttagagat
gagacttatgctgcctttgagaatatataccctgttctcacaggattccggaaagttccg
caatggtatggcaacgtggtgttgtgtgcatcagtttttattactatagcagtaattttg
tttatttgcactgattatcttgatgaatggatttacatgtgccttagaagcccctcctgt
tcacgtgtaatgggcattagttcccttgtcatggaagttgatctggcatag
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integrated database retrieval system
