Salvia splendens (scarlet sage): 121758900
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Entry
121758900 CDS
T07627
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121758900
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121758900
REST complex
121758900
Heterochromatin formation proteins
Other heterochromatin formation proteins
121758900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
121758900
NCBI-ProteinID:
XP_042010267
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All DBs
Position
12:12374810..12382093
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AA seq
1307 aa
AA seq
DB search
MKRSRDDVFATAIPSPTEPSGKAQVSTARSAQKLQTTDALSYLKVVKEKIQDKGDLYNEF
LDVMKEFKAQRIDTSGVIVKVKELFRGERDLILGFNAFLPKGYEITLAAEDEPLLKKKPV
DFEEAIGFVNKIKTRFQGDHHVYNAFLDILNIYRKNNMSITEVYQEVSVLFQDHADLLVE
FTHFLPYTTAAAPVHHAQPISNHILLQNSGGSPMRMTRPIEQKPAAGNSFVTCPDSEQWK
VSKEDNKTELHYDDNLDSVRKFTGGDDSANDQLHKGTEDPVSIFCGKVKERLNDSESYKK
FLDCVRSYRSKFVTLPQFQKLVASILGSHPDLKEQCEDFIIYVEKTGSKQNFRSLKVDDR
EADMNNKEDSDKNIDHGNTERDRSDKALAFSKDVQGQKLSITKEKFMAKPIHELDLSNCE
SCTPSYRLLPDNYPIPSVSCRTKIGSEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
EDDRFELDMLLESVNATTKRVEELLDSMNSHTDKTGSSSHIGDHLTAVNLRCIERLYGDH
GLDVRDVLRKNAPLALPVILTRLQQKQEEWARCRSDFNKIWAEIYAKNYHKSLDHRSFYF
KQQDTKNLSAKAFLAEIREMSEKDQNEDEKILSISGGYKQPIKPHMKFEYPDPDIQEDLY
QLMKYACGEVCTPEQHDKVMKIWTTFIEPVFSIPSRPSVEDMKETVNNDSAKTLANFGEG
NVIPVGEAASNMSKTGGDNIPTEEPRCSRILMGHGDNGVKNCGSPNADNAACEIDISCNA
TQNGVLHTDSSIIPAMSGTSKQAGFFEQVTPNSTGEKNINLENGSSSAIGDHVLNNKPQG
GLYMKVTSSSVEGIQAQRCQNEIIGFGKDEREEGELSPSKNSEGGMLAAFGEVAYGSCNS
RQTGGEALCVVEVGRENDANADDEGEESAKGSSDSENGYKIAEVSATDSADREERSPGDH
DEDEDHDENDNKDASEHEAEGVADIHENEGMAAFSGHVLHSVKPLTTKLPAALHVKERNS
EIFYGNDSFYLLFRLHQILYERMRSAKLHSSSPENKWRILNDSNTTDSYARFKDALHSLL
DGSSDNAKFEDDCRTIIGAQSYILFSLDKLIHKLVKQLQTIASEEMENKLIQLYSYERSR
SPRKFTDDIYHENARFLLPEDNLYRIECVPSPTCLTVQLMKNEQDKPEETAIYMVPAFAA
YLNDELLATAPERKGKHRIFLKRNKRKFQSQDKISDTSKPKEQLVTHNGLEIKVASNTLK
ASYVIGSEDFLYRLSKRRKTQFHSSSSSSASNGCSPRVRRTCRVMVG
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgatgtgtttgcgactgccattccttctccaactgagccttct
ggaaaagcccaggtgtcaacggcaaggagtgcgcagaagctccagacgactgatgccttg
tcatatctcaaagttgtgaaggaaaaaattcaggacaaaggggacttgtataatgagttt
cttgatgtcatgaaagagttcaaggctcaaagaattgatacatctggcgttatagtaaaa
gtgaaggaattatttagaggggaacgggacctaattctgggtttcaatgcctttttacca
aagggatatgaaattaccctcgcagcagaggatgaaccacttctaaaaaagaagcccgta
gattttgaagaagcaattggttttgtaaacaaaataaagaccagatttcagggtgaccat
catgtatacaatgcatttcttgacatcttgaatatatacagaaaaaataatatgtccata
acagaagtctatcaggaggtttcagttctttttcaggatcatgctgacctccttgtagag
ttcactcattttttaccttatactactgctgctgcccccgtccatcatgctcaacccatt
agcaatcatatcttgctgcagaacagtggaggctctcccatgagaatgactcggcccatt
gagcagaagcctgctgcaggcaattcatttgttacttgccctgattcagagcaatggaaa
gttagtaaagaagataacaaaactgagcttcattatgacgataacttggacagtgtaaga
aaatttaccggcggagatgattctgctaatgaccagttacataaaggaacagaggaccca
gtgtcaattttctgtggaaaagtgaaggaaagattgaatgattccgaaagctacaagaag
tttttggactgtgttcgttcctatagaagcaagtttgtcacactgcctcaatttcaaaag
ctggtagctagtatactgggatcacatccagacctcaaggaacagtgcgaagatttcata
atttatgttgagaagacaggcagcaaacaaaatttcagatctctaaaggtagatgatcgt
gaagcagatatgaataataaggaagacagtgataaaaatatagatcatggcaatactgaa
agggatagatccgacaaggctcttgcttttagcaaagatgtccaaggacagaaactgtcc
attacaaaggagaagtttatggcgaaacccatccatgaacttgatctctctaactgtgaa
agctgcactccaagttaccgacttcttcctgacaattatccgattccatcagtgagctgt
agaaccaagattggttctgaagtgctgaatgatcattgggtgtctgtcacttcaggaagt
gaggactattcgttcaaacatatgcgcaaaaaccaatatgaagaaagcctgttccgttgt
gaggacgataggtttgaacttgacatgctgttggaatctgtgaacgcaacaacaaagcgt
gttgaagaattgttagatagtatgaactctcatactgacaagactgggagttcatctcat
ataggtgatcatctgacagctgttaaccttcggtgtattgagcgtttatatggtgatcat
gggcttgacgtaagggatgtgcttaggaagaacgcaccccttgcactgccagttatttta
accaggctgcagcagaaacaggaagaatgggcaaggtgccgctccgatttcaataagatt
tgggctgaaatttatgctaaaaactaccacaagtcactcgatcatcggagcttctatttt
aagcaacaagatacaaagaacttgagtgctaaagcatttttagctgaaatcagagaaatg
agtgaaaaggatcagaatgaagatgagaagattctttcgatcagtggtggatataaacaa
cccatcaaacctcatatgaagtttgagtatcctgatcccgacattcaagaagatctatat
cagctcatgaaatatgcttgtggagaagtgtgtacacctgaacaacatgacaaagtcatg
aagatttggacaacattcattgaaccagtgttcagcattccttcccgtcctagtgtggag
gacatgaaagaaactgtaaacaatgattcagctaaaacattggccaattttggtgaaggg
aatgtcatccctgttggcgaggctgcttcaaatatgtccaaaactggaggtgataatatt
ccaactgaagaaccccgttgcagcagaatactaatgggacatggtgataatggggtcaag
aattgtggttctcctaatgcagataatgctgcgtgtgagattgatatatcatgcaatgca
acccaaaatggagtattgcacacagattccagcatcatacctgcaatgtcagggaccagc
aaacaagctggtttctttgagcaagttactccaaactctacaggagaaaagaacataaat
ctggaaaatggatcaagcagtgctattggtgatcatgtgctgaataacaaaccacagggt
ggtctttatatgaaagttacttcctcttcagttgaggggatccaagctcagagatgtcag
aatgaaattataggtttcggtaaagatgaacgagaagaaggtgagttatcccctagtaag
aattctgaaggcggcatgttggctgcatttggagaagttgcgtatggttcttgtaatagt
agacagactggaggagaagcactttgtgttgtggaggtgggcagggaaaatgatgctaat
gctgacgatgaaggtgaggaaagtgcgaagggctcctcagacagtgagaatggctataaa
attgctgaggtttcagcgactgattcagccgacagagaagagcgctctcccggagatcat
gatgaagatgaggaccatgatgagaatgacaacaaggatgcgagtgaacatgaggcggaa
ggcgttgcagacatccatgagaatgagggaatggcggcattttctggtcatgttctgcac
agtgtgaagcctcttacgacgaaattgcctgctgccttacatgtgaaagagaggaactca
gagattttctacggaaacgattccttttatttacttttcaggcttcaccaaattctatat
gaaagaatgcgtagtgctaagttacattcgtcgtcgccagaaaataaatggaggatcttg
aacgattctaatacgacagattcatatgctagatttaaggatgcactacacagtttactg
gatggatcatctgataatgcaaagttcgaagatgattgtcgaactattattggtgctcaa
tcctacatcctcttttcactagacaaactgatacataaacttgtcaaacagctgcaaaca
attgcgagtgaggagatggagaacaagctcattcagctatattcatacgaaagatcaaga
agtcctcgaaaatttactgatgatatttatcatgaaaatgcacgttttcttctccccgaa
gacaacttgtatcggatagaatgtgtgccttccccaacttgtttaacggttcagctcatg
aaaaacgagcaggacaaacctgaagagacagctatctacatggtccctgcgtttgcagct
tatttgaatgatgaactactagcaactgctccggaacggaaaggaaaacataggatattc
ttgaagagaaacaaaagaaaatttcagagtcaagacaaaatctccgacacctccaaaccc
aaggaacagcttgtaactcataatggtcttgaaatcaaggttgcttccaatacactgaag
gcttcttatgttataggttcggaagacttcttatatcgcttgagcaaaaggaggaaaact
cagtttcacagcagttcaagcagtagcgcttccaatggttgttctccaagagttagaaga
acctgcagagtgatggttggttga
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