Salvia splendens (scarlet sage): 121759131
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Entry
121759131 CDS
T07627
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121759131
03410 Base excision repair
121759131
03420 Nucleotide excision repair
121759131
03430 Mismatch repair
121759131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121759131
03036 Chromosome and associated proteins [BR:
sspl03036
]
121759131
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121759131
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121759131
DNA Replication Termination Factors
ELG1-RFC complex
121759131
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121759131
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121759131
Check point factors
HRAD17(Rad24)-RFC complex
121759131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
AAA_5
AAA_24
RCF1-5-like_lid
AAA_11
nSTAND3
AAA_25
AAA_19
AAA_assoc_2
AAA_28
MeaB
bpMoxR
DNAX_ATPase_lid
ABC_tran
AAA_18
AAA_30
IstB_IS21
AAA_3
AAA_7
NTPase_1
RNA_helicase
DO-GTPase1
KTI12
Motif
Other DBs
NCBI-GeneID:
121759131
NCBI-ProteinID:
XP_042010561
LinkDB
All DBs
Position
12:complement(15104450..15107962)
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AA seq
331 aa
AA seq
DB search
MASASSSSSGPEIPWVEKFRPTKVSDIVGNQDAVARLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHV
KNMVRQVIDGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFA
HMRICDGVGSYLQMSGLLAKLALARETAKAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcatcttcatcgtcgtcgggcccagagatcccatgggtggagaagtttcgc
cccactaaggtgtctgatatcgtcggcaatcaagacgctgtcgcccgcctccaagtcatc
gcccgtgatggcaacatgcccaatcttattttggctggtcctcctggaactggtaagact
actagcatattggctcttgctcatgagctcctcggcccaaattatagagaggcagtcttg
gagctaaacgcatcagacgatagaggaattgatgttgtgagaaacaaaataaagatgttt
gcccagaagaaagttacattgccccctggaaggcacaagataataattttggacgaagct
gacagcatgacttcaggagctcaacaagctttgagaaggacaatggaaatatattctaat
tctacacgttttgggctagcttgcaacacttcatcaaagattattgagcctattcagagt
cgatgtgctcttgttcgattttctagattatctgatcaagagatccttggacgtctcatg
gtggtggttgcagcagaaaaggtaccttatgtcccagaaggtcttgaagcaattattttc
actgctgatggtgatatgaggcaagcattgaacaacttgcaagccacaaatagtggattt
gggtttgttaatcaagaaaatgttttcaaggtttgtgatcaaccccatcccttgcatgtc
aaaaatatggtacgccaagttattgatgggaaatttgacgatgcttgtgctggattgaag
cagctctatgatttgggctactcaccaactgatatcattaccactctattccgaatcata
aagaactatgatatgcctgagtatctgaagttggaatttatgaaggagacaggatttgct
catatgaggatctgtgatggagttggttcatatcttcaaatgtctggtttgcttgcaaag
cttgcactggcccgcgaaacagccaaagcagcttag
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integrated database retrieval system
