Salvia splendens (scarlet sage): 121759290
Help
Entry
121759290 CDS
T07627
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121759290
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121759290
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121759290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
DUF2921
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
zf-P11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121759290
NCBI-ProteinID:
XP_042010758
LinkDB
All DBs
Position
12:complement(1402499..1407026)
Genome browser
AA seq
558 aa
AA seq
DB search
MGVMKRWNFWGVLFRIGFGVLVVTWPVSGLRPLRQRRPWGEEWLPIGKEKQELGPFSSWN
ITGTYRGSWKFPDSANSSSKFADFRKSSGNSVLELISTPTKITGVHYVQGVIIFHDVFDN
ENDVRGSQIRVEGVYIWPFRQLRMVANSGKESEFGQEDDYLLSNPYHLLGVFSSQVFQES
PREKIWKRKHSPIYEMEKHCNIEISAQISRVSSKNNGGDQDKYYLEGLMESPSVDDDIDC
FSPMLLNATSVNVEAYYNKAVNYTLMVTFISFLEVLLLIRQMEHSNTQSGAAKVSLVMIG
HQAIMDAYLCLLHLTAGILVESLFNPFATAGFFKFVVFSIFEMRYLLAIWKANRPSINGE
NWEAMRRELSVLYSRFYGILLGGILVMYEFHNFLRIILLLLHSFWIPQIVINVVRDSRKP
LHPHYILGMTLTRISIPLYVFGCPHNFTRIEPDRMWCICLALFMALQVFILLLQHYLGSR
WFIPRQILPEKYSYYKRFLQGSNHATDCVICMTAIDLSQRSNDCMVTPCDHFFHGSCLQR
WMDIKMECPTCRRPLPPA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgatgaaaaggtggaatttttggggggttttgtttcggattggttttggggtt
ttagtggtgacgtggcctgtgagtggtttgaggcctttgaggcagaggcggccttggggt
gaagagtggcttcctataggtaaggaaaagcaagaattggggccgttttcttcttggaat
ataacagggacctatagagggagctggaagtttccagattccgcaaatagctcttccaag
tttgctgattttaggaagtcgagtggcaattcagtactagaactaatcagtacaccaaca
aaaataaccggtgtacactatgtgcagggagttataattttccatgacgtgtttgacaac
gagaatgatgttcgcggatctcaaatcagggtagagggtgtgtatatatggcctttccga
caactaaggatggtggctaacagcggaaaagagagtgagtttgggcaggaagatgactat
ttattgtcgaacccgtatcacttgctcggagttttctcgtcccaggtgtttcaggaatct
ccacgagaaaaaatctggaagaggaaacactccccaatttacgaaatggagaaacactgc
aacattgaaatctctgcgcaaatttcacgagtgtcttctaaaaataatggtggagatcaa
gataagtattatctagaaggactaatggagagcccttcagtggatgacgacatagattgc
ttctcgcccatgctcctaaatgcgacttctgtcaacgtcgaggcctactataacaaagca
gttaactacactttgatggtcacctttatatctttcctcgaagttctgttgttgatccgg
caaatggaacacagcaacacccaatccggggctgccaaagtttcgcttgtgatgatcggt
catcaggcgataatggatgcttatctctgccttctgcatctcactgccggaattttagtc
gaatctctatttaacccttttgcaactgccgggtttttcaagttcgtcgtcttctcaata
ttcgaaatgcggtacctacttgcaatatggaaggcgaacaggccatcaatcaacggagag
aattgggaggcgatgaggcgcgagctctccgttctttacagtcgtttttacgggatcctc
ttgggcggcattcttgttatgtatgagtttcacaattttctgcggatcatccttctcctc
ctccactcgttctggattccgcaaatagtgattaacgtagttcgtgactcgaggaagccg
ttgcatccgcattacatcctagggatgactctaactcgaatttctattccgttatacgta
ttcggctgcccacataattttacgcgaatagagcccgaccgtatgtggtgtatctgttta
gccctttttatggcactgcaagtcttcattcttctcctacagcattacctcggatcccgt
tggttcattcctcgccagattttaccggagaaatatagctactataagcggttcctgcaa
gggtcgaaccacgccacggattgtgtcatttgcatgaccgcgatcgacctcagccagcgc
tcgaacgattgcatggtgacgccgtgcgaccatttctttcacggcagctgtttgcagaga
tggatggacataaaaatggaatgcccaacctgccgccgtccccttccgcctgcatag
DBGET
integrated database retrieval system
